AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00751 ATGGACAGTCAATCTCGTCAAAAATCACACTGGCCAGTTAAGGTGGAAAATCGGAAACATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGCGGAGGCTGTGATAATCGGGGGAATGGTGTTAGATATACAAGCCACTCCTTCTATTCCTCCAAACCCTAGAACCACCGCTCCTGGCAAGGTGTGTTATGCAGCGGGAGGAGTAGCAAGGAACATTGCCGAGTGTGTATCAAAACTTGGAACAAAGCCTTGCATGATAAGTACATTAGGATTGGACATGGCAGGTAATTTGCTGTTGGAGTACTGGAAATCTGCAGGATTATCGATGGAAGGCATTCGAATGGGCCAAGAGATAGACACTCCAGTTGTATGCATTGTCTTTGATACTTATGGAGAACCGGCCGCTGCTGTTGCAAGTGTTGAGTCTGTTGAACGTTTTCTTACTCCCAAATGGATTGCACAATTTAAATCGAATATAGCATCTACTCCTATTGTGATGGTTGATGCAAATTTAAGTCCAGCAGCTCTTCAAGCATCTTGTGAATTGGCAGCGGAGTTTGGAACCCCAGTGTGGTTTGAGCCTGTGTCTGTAGCGAAGTCGAAAAGAATTGTTTCAGTTGCCAAGTATATAACCTTTGCTTCACCGAACGAAGATGAACTGATTGCCATGGCAAATGCTCTCTCTTGCAAAGATACATTTTCTCCGATCCAAAAGGACAACAGCACAACAACATCTTTATTTCAACAGCTAAGACCCGCAATCTGGGTTTTGCTCGAGAAAGGCATTAAAGTGGTGGTTTTAACCCTTGGATCGAAAGGGGTATTATTATGTTCTAAAGGGCGCCTCAACTTTCAACATAATCCTGGGCCAAAGAGAAACAATAATAGGGCACATGAATTTAGCAAAAAGTTGCACGAAACCATAAATCTACACTGCCCACCTGACCGGTTTTTTAGCGCGTTAAGGCTTGAAGGAAGCTCTATTAGTAGCAGCCCATACGTGGTGCATTTTCCAGCCGTATCATCTGCATCAGTTGTGAGGCTAACCGGAGCTGGCGATTGTCTGGTTGGCGGTGCAGTTGCTTCCATATGTGCAGGTTTGGATGTGATGCAAAGTATTGCGGTTGGAATAGCAGCAGCTAAAGGTGCTGTTGAGGCGGAGAACAACGTACCCACCGAGTATAGTTTGGAGAAAATCGCAGAGGATGCAAGATCGGTGTATTCGGGTGCCAACGTTGTATTTTGTCAGTCATTGTTATAA 1266 44.47 MDSQSRQKSHWPVKVENRKHEEEEEEEEEEGEAEAVIIGGMVLDIQATPSIPPNPRTTAPGKVCYAAGGVARNIAECVSKLGTKPCMISTLGLDMAGNLLLEYWKSAGLSMEGIRMGQEIDTPVVCIVFDTYGEPAAAVASVESVERFLTPKWIAQFKSNIASTPIVMVDANLSPAALQASCELAAEFGTPVWFEPVSVAKSKRIVSVAKYITFASPNEDELIAMANALSCKDTFSPIQKDNSTTTSLFQQLRPAIWVLLEKGIKVVVLTLGSKGVLLCSKGRLNFQHNPGPKRNNNRAHEFSKKLHETINLHCPPDRFFSALRLEGSSISSSPYVVHFPAVSSASVVRLTGAGDCLVGGAVASICAGLDVMQSIAVGIAAAKGAVEAENNVPTEYSLEKIAEDARSVYSGANVVFCQSLL 421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00751 421 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 68 92 IPR002173 GO:0016301(InterPro)
Sain12g00751 421 MobiDBLite consensus disorder prediction 1 21 - -
Sain12g00751 421 CDD YeiC-kinase-like 36 387 - -
Sain12g00751 421 PANTHER ZGC:136858 21 402 - -
Sain12g00751 421 Pfam pfkB family carbohydrate kinase 34 293 IPR011611 -
Sain12g00751 421 Pfam pfkB family carbohydrate kinase 326 389 IPR011611 -
Sain12g00751 421 SUPERFAMILY Ribokinase-like 35 390 IPR029056 -
Sain12g00751 421 Gene3D - 30 412 IPR029056 -
Sain12g00751 421 PRINTS Ribokinase signature 37 58 IPR002139 GO:0016301(InterPro)
Sain12g00751 421 PRINTS Ribokinase signature 207 222 IPR002139 GO:0016301(InterPro)
Sain12g00751 421 PRINTS Ribokinase signature 267 278 IPR002139 GO:0016301(InterPro)
Sain12g00751 421 MobiDBLite consensus disorder prediction 1 32 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00751 - -