AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00794 ATGGCCTCGAAGATCATGCTTTTGACGGTGATGGCGACAATGGTGATCGCGGTTTGTTCGTTGGACACCAACAGCGTGTTCAATCCATGTTCAGATGCAAAAGTTAAGAAACGAGATGGATTTACATTTGGATTCGCGTTTTCTTCTAAAGAATCCTTCTTCAACAAACAAATCCAGCTTTCACCGTGTGATCGTCGTCTCTCGCTTGGTGGAACCGATGCTCAACTGGCCGTATTCCGGCCAAAAGTCGATGAACTCACTTATCTCACCATTAATGGCACCGACTTTGATCCGGCGAAAGCTGGTGGATATATGGTTGCATTTGCTGGAAGACAATATGCAGCAAGATCCATGCCTACTTTTGTTGCTGATAAATCCAATATTATCACAAGTTTCACTCTGGTTCTTGAATTTGAAGAAGGCACCCTTGTAAACTTACATTGGAAGAAATTCGGGTGTAAATCATGTGCAGAGGGATCCGCCATTTGCCTCAACAATCAAGACTGTGCTACACCAATCTCGAAATGTAAGGCTCATGGCGGATCAGTTGACTGCAAAATTAAGATACAATTAGCATTCTCTGGTACGGATAAGGCCTTGGAAGTTCTTAACTCGTGGTACGAAGTCGAACGACTTCGACAATATTCACTAGTTGGGTTGTACCAAAACATCAATGACATGGTTATGGGTCCATAG 696 43.39 MASKIMLLTVMATMVIAVCSLDTNSVFNPCSDAKVKKRDGFTFGFAFSSKESFFNKQIQLSPCDRRLSLGGTDAQLAVFRPKVDELTYLTINGTDFDPAKAGGYMVAFAGRQYAARSMPTFVADKSNIITSFTLVLEFEEGTLVNLHWKKFGCKSCAEGSAICLNNQDCATPISKCKAHGGSVDCKIKIQLAFSGTDKALEVLNSWYEVERLRQYSLVGLYQNINDMVMGP 231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00794 231 PANTHER DPH3 HOMOLOG-RELATED 13 226 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00794 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr10:117652541 Sain12g00794 Sain-Chr12:19567861 dispersed
Sain Sain-Chr12:19567861 Sain14g00475 Sain-Chr14:10265709 dispersed
Sain Sain-Chr12:19506959 Sain12g00794 Sain-Chr12:19567861 tandem
Sain Sain-Chr12:19567861 Sain12g00795 Sain-Chr12:19628602 tandem