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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00805 ATGTCAACTACGCCGGCGCTCGATCCGGCGCAACAGCAACCGCCTCCATTCCCGCCGGTAATGCAAGAACAGGCCTACAAACCTCATTCGAGCTACCACGGGTCTGTCGGACCGGTAATTGGAGTTCTTGCGGTGATTATGGTAATGGGTGCGGTGGCTGTAATGATCGGCCGGCTCTGTTCCGGCCGTCGGATCATGGGTCACGGACAATACGACTTTGAAGGGTGGGTGGAGACCAAATGTTCCACGTGTATCGACGGGAGGCTTGGCCCGCCGCCGCGGCGGGAACCGGTGCCGGTGGTGGTGGTGGTGGAGACCAACGGAAGCAATGCCTCGTCAAGTGAAGCTGCTGCCGCGCCGGCTGAAATTCCGGCCGACGAAGCGCCACCACAGGCGGAAGAAGCGGCTAATCATCAACCACCACAAGAATAG 432 59.95 MSTTPALDPAQQQPPPFPPVMQEQAYKPHSSYHGSVGPVIGVLAVIMVMGAVAVMIGRLCSGRRIMGHGQYDFEGWVETKCSTCIDGRLGPPPRREPVPVVVVVETNGSNASSSEAAAAPAEIPADEAPPQAEEAANHQPPQE 143
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00805 143 PANTHER OS02G0708000 PROTEIN-RELATED 3 131 - -
Sain12g00805 143 MobiDBLite consensus disorder prediction 1 21 - -
Sain12g00805 143 MobiDBLite consensus disorder prediction 107 143 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00805 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138835 Sain12g00805 Sain13g02083
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:19894610 Sain15g00584 Sain-Chr15:57129696 dispersed
Sain Sain-Chr12:19894610 Sain13g02083 Sain-Chr13:124891694 wgd