AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00812 ATGGCCCCTGCGAAGCCAACCGGTCGCGCGATCTCGCAACAAGCATTCGATGAAATGGTAAAGGAAAACATAGACGATCTAGGTATGGAACCAACTGAAGCCCTAAGTGACGCCATCGAAACCCTTACACTTCAAGGCGTAGATCTCTCCGGTATCGTCACCACTACACTCCCTGGAGAAACCAATCCCGTGATCCAATCTCTTGATAGAATCAAGCAATTACAGATTTCTGATTGGACAGATGAAGCAGTCGTAGATGAGGCGCTAAGTTTGTTGGATAATCTGACGGATTTGTCTCGTGTTGAGGGATCTGGAAATGCTGCAATTGCTACGAGAAATGGAGGTGTGGAGTTGATGTGTTCTATTTGTTCGAAGCTTGACGTTGGTGGTCGTAATTCAGCACTTGTATCGGCTTTGAATGCACTCGCTGCATTTCTTCATGATCTTCAAAGTACAGAAACTTTTCGGCAGAATGGTGGACCGAAAATGGTGGTTGATATCTTGAGTGATGGAACTCAAAATGTGAATATCTTGAATAGTGGCTTTTCTGTTGTTGCTGCTGCTACAACTGGTAATGAGGTTCTCAAGGAATCTTTTATGGACTTACACATAGATGAGTTGATGGTTTCAATCATGAGGAAGCATAGTAAAGGGAGCATCCCTTGTTTATATGATGCTATTCGAGTGCTTTTAACAGCTGATGATAACCGTGTATTGGCTTCACAAGTTTATGGGTATGCTCGACAATTTGCGAAAACTGGAATTGCTGAAGCTCTTGTAAAGTCACTTGAAGACGGGATTAGCTCACCAAGTCTGGTATCAGCAACTATTGCCCTAAAGGCTGTTGCAGTGAATGATGAAATATGCAGATCTGTTGCTGAAAATGGTGGTATAGATTCTTTGCTCATTTGTATTGATGACTCTGGTGTACAGGGGAACAAAGTTGTGGCTAAAGCTTGCTGCTCCTTGTTAACCAAGTTGGCTGGAAGTGACTTTAACAAGAGTGCCATCATTGAAAGGGGAGGTCTGAATAGACTCATAACGCTTTCTAGCAGACTTGCTGATGATTCTTCTGTCATCCAAGAGGTAATGTTAATCATATGTAGTCTGTGCCTACGATCACCACAAAATGCAGCATTGGCAATGGAAGCTGGAGCAGGAGAGCTGGCTATTCAGTCTATGCAGACGTTTCCTCAAGCATATCAGCTGCAGAAGAATTCTTGTCTGATGATTCGTAATCTTGTTGCCAGGAATCTGGAAAACAGGTCTATTTTGCTGAGTAATGGTATTGAGAAGATTATACGAAATGCAAAAGAAAGCCACAAAAGCTGTAGAGATGCGGCCACTGATGCACTTAGAGACTTGGGGTTAGAAAACTACAACTCGTAG 1389 42.98 MAPAKPTGRAISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGIVTTTLPGETNPVIQSLDRIKQLQISDWTDEAVVDEALSLLDNLTDLSRVEGSGNAAIATRNGGVELMCSICSKLDVGGRNSALVSALNALAAFLHDLQSTETFRQNGGPKMVVDILSDGTQNVNILNSGFSVVAAATTGNEVLKESFMDLHIDELMVSIMRKHSKGSIPCLYDAIRVLLTADDNRVLASQVYGYARQFAKTGIAEALVKSLEDGISSPSLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDDSGVQGNKVVAKACCSLLTKLAGSDFNKSAIIERGGLNRLITLSSRLADDSSVIQEVMLIICSLCLRSPQNAALAMEAGAGELAIQSMQTFPQAYQLQKNSCLMIRNLVARNLENRSILLSNGIEKIIRNAKESHKSCRDAATDALRDLGLENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00812 462 PANTHER UNCHARACTERIZED 5 456 - -
Sain12g00812 462 SUPERFAMILY ARM repeat 77 447 IPR016024 -
Sain12g00812 462 Gene3D - 240 462 IPR011989 -
Sain12g00812 462 Gene3D - 62 239 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00812 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:20196038 Sain7g00577 Sain-Chr7:53281904 dispersed