AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00825 ATGTTGACCAGTGGAGGAGGTGGAACCTTTTACTGGGTTCGAAATGAGGAGGAGACAGCATCTTCATCCAAAATCGAAGGAATCGTTGTAATTTTCGCTTGGGGTTCGCTTGAAGAGTGCCAATTGAAGAATTATGTGAATCTGTATTCGTCTCTCGGTTGGAACTCTCTTCTTGTTCTTTCCGATTTTCTCAACCCATTTTTTCCTGAGAGAGCCACCTCACTTGCGTTTTCCGTTCTCAATGAGCTTTTAGAGGAGTTGAGGAGTAGACCATCCCCTTTAGTCCTTGCTTCCCTTTCTGGCGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATTATTGAAGGAACATGTGAAGCACATCTCAATTTGGATGATAGTCGATTGATCATGACCTGCATCTCTGGTCAAATTTACGACTCTGGTCCAGTAAATGTTACTGGCGATTTGGGTGCTCGTTTTGCTCTACACTCTTCCGTTCTCAACCTGCCCGGTTCATCAAAGTTGGTATCATTGGTTGCGAAAGGTGTCACCTCTGGTTTGGATGCTCTATTCCTTACTAGATTTGCATCCCAACGCTCCGAGTACTGGCAAACGCTTTACTCCTCAGTTGGTTTGGGGGCCCCATTTCTGATATTATGTTCGGAAAATGATGATCTTGCTCCATATCCGGTTATATGCTCATTTGCTCAACAATTACAAGGATTAGGAGGACATGTTCGAGTTATCGGATGGAAGGACTCTCCGCATGTAGGTCACTACAAGCACAATCCGATCCAGTACAGAGCAGCTGTGAGGGAGTTTCTTGAGCACTCTGTTTCGATATTTAACGAAAAACTAAAAAAAGTTGGTGAAAGATGTGGCATGGAGGGTATGCACGATAAGATATACGAACTAATTTGCGACCTCCAGAATGCAGCAGTGGACTCAAACCAGAGCCTTAGAAGAGTAGCGGTGGGGCCAAACGACCACTTTTTCCTGCCAAGCTCTGAAAGTGGTAAAGAATCTGGATCGTTACAAGATGAGCAGAAAGAAAGAAGAGGTGTCCATTTGGCAAGTCATTCTCCTCCGAGCCTTAACCCTCACAGTGTTCTTGGTCAAGTCCTGTTTGATGTGTGTGTGCCCAAGAACATCGAAGGTTGGGATATTAAGTTCGATAAGAGGCAACCATTTGCATCTGCTCGTAAGCAATCATCTCCGAATGCATTAAAGCGTATGCGACGATCAAGATTATGA 1236 44.42 MLTSGGGGTFYWVRNEEETASSSKIEGIVVIFAWGSLEECQLKNYVNLYSSLGWNSLLVLSDFLNPFFPERATSLAFSVLNELLEELRSRPSPLVLASLSGGSQACMYKVFQIIEGTCEAHLNLDDSRLIMTCISGQIYDSGPVNVTGDLGARFALHSSVLNLPGSSKLVSLVAKGVTSGLDALFLTRFASQRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQLQGLGGHVRVIGWKDSPHVGHYKHNPIQYRAAVREFLEHSVSIFNEKLKKVGERCGMEGMHDKIYELICDLQNAAVDSNQSLRRVAVGPNDHFFLPSSESGKESGSLQDEQKERRGVHLASHSPPSLNPHSVLGQVLFDVCVPKNIEGWDIKFDKRQPFASARKQSSPNALKRMRRSRL 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00825 411 PANTHER UNCHARACTERIZED 9 276 IPR008547 -
Sain12g00825 411 MobiDBLite consensus disorder prediction 337 351 - -
Sain12g00825 411 SUPERFAMILY alpha-beta-Hydrolases 196 270 IPR029058 -
Sain12g00825 411 MobiDBLite consensus disorder prediction 391 411 - -
Sain12g00825 411 Pfam Eukaryotic protein of unknown function (DUF829) 134 381 IPR008547 -
Sain12g00825 411 Gene3D alpha-beta hydrolase 156 278 IPR029058 -
Sain12g00825 411 MobiDBLite consensus disorder prediction 326 358 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00825 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:21134669 Sain6g00648 Sain-Chr6:18635394 dispersed