Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00840 | ATGGCAGACTCCAAACAACCTCCTCATCTTCTGTTCAAACAACGCTCCTGGTCCCCTGACATCCACCGCGACAAAGAATGGCAGAAGCTCAAGTTCAAACAGTTACGACGTGATCGCCACCGCCGCAGCAAGAGTATTGATGCCGACGTTGATGTCACTGATGATGATGTAAAGGAGCTTAAAGCGTGTTTTGAATTAGGTTTCGGTTTCGATCCGTCTAACGATTTGGATCCGAAACTCACACAAGCTTTTCCCGCTCTCGAGTTGTACGCAGCCGTTAATCGGCAGTACAATAATAGACTCCTCTCAAGGTCTTCTTCATCGCTAAGTTCCGATTCTTCTTCAAGTTCATCAAGCTATACCACCGCCATTATTGATCCAAGTGATGATCCGCAAAAGGTGAAGACGAAATTGAAACATTGGGCGCAAGTTGTTTCGTGTTCTATTCTGGATTCTTCTTCGCAGCCAATAACAAAAATTGCAGAATAG | 489 | 45.19 | MADSKQPPHLLFKQRSWSPDIHRDKEWQKLKFKQLRRDRHRRSKSIDADVDVTDDDVKELKACFELGFGFDPSNDLDPKLTQAFPALELYAAVNRQYNNRLLSRSSSSLSSDSSSSSSSYTTAIIDPSDDPQKVKTKLKHWAQVVSCSILDSSSQPITKIAE | 162 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00840 | 162 | MobiDBLite | consensus disorder prediction | 104 | 131 | - | - | |
| Sain12g00840 | 162 | PANTHER | OSJNBA0071G03.3 PROTEIN | 10 | 150 | - | - | |
| Sain12g00840 | 162 | MobiDBLite | consensus disorder prediction | 104 | 126 | - | - | |
| Sain12g00840 | 162 | Pfam | Protein of unknown function (DUF1685) | 52 | 110 | IPR012881 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00840 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr14:40951490 | Sain12g00840 | Sain-Chr12:21667470 | transposed | |
| Sain | Sain-Chr11:48968854 | Sain12g00840 | Sain-Chr12:21667470 | wgd | |
| Sain | Sain-Chr12:21667470 | Sain13g02053 | Sain-Chr13:124048869 | wgd | |
| Sain | Sain-Chr12:21667470 | Sain5g01435 | Sain-Chr5:82846889 | wgd | |
| Sain | Sain-Chr12:21667470 | Sain8g02564 | Sain-Chr8:160838976 | wgd |