Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00848 | ATGGAGAGAATCAAATTTGGATGCAATGTGTTCTTCACAACAACTCTCTTCGCCACACTTGTCTTGTTCACCTACGCTTCAGCACTCAAGGAAGGACAAACGTGCATAAATAATAACAACTGTGACTCAGGGTTACATTGTGAGGCTTGCGTCGCAGATGGCAATGTTCGTCCTCGGTGTACTCGTATTCAACCTCTAAATCCTTTATCTAAGGTGAAAGGATTGCCATTCAATCGGTACTCGTGGTTAACGACGCACAATTCGTTCGCTAGATTGGGAGAGAAGTCGGATACTGGCTCAATCGTTCTCGCTCCGTCGAACCAGCAGGATACTGTTGGTTCTCAGCTCAATAATGGTGTGAGAGGGCTGATGCTTGATTTGTATGACTTTCAGAATGACATTTGGTTATGTCATTCCTTTGGTGGCAAATGCTTCAACTACACAGCTTTTCAACCGGCTATCAATGTACTGAAAGAGGTTCGAGATTTCCTAGAAAAGAATCCTACTGAAATCGTGACTATAATAATTGAAGATTACGTTACTTCTCGAAATGGTCTAAACAATGTCTTCAACGCTGCTGGTTTGAAGAAATTCTGGTTTCCAGTAGCTCGAATGCCAAGTGATGGCCGTGATTGGCCTACAGTTGACTCCATGGTCAAACAGAATTTGCGCTTGGTAGTTTTCACCTCCAAATCTTCCAAAGAATCAACGGAAGGGATTGCATATGAGTGGAAGTACTTGGTCGAAAACCAATATGGAACTGATGGGATGAAAAGTGGTCTATGCCCTAGTCGTGCAGAGTCAGCTGCTATGAACACTAAATCAAGACCACTGGTTTTGATGAACTACTTTCCAGATACCCCGGATATAACCCAATCTTGCAAGCACAACTCAGCCCCGTTAATAAGCATGCTGAACACATGCCATGATTTAGCCGGCAAACGCTGGCCTAATTTCATTGCTGTCGACTTTTACAAGAGGAGCAACGGTGGGGGTGCACCTGCTGCCGTAGATATGGCCAACGGGCAGCTAGTTTGTGGCTGTAACAACATTGCAGTATGCAGGCCAAACATGACGTTTGGAGTCTGTAACTTACCGGAAGCGGTTGCAGCTCCAGCCCCAACTACAGCTGGGAAAAGCACGACGAATGCGGGTAGTCAACTGGTTCGATCTGATTGGTTGTTTGGCACAGGTTTGATGGCTATCACCTTGTCTTTTGTAAAGCTCATTTAG | 1233 | 45.01 | MERIKFGCNVFFTTTLFATLVLFTYASALKEGQTCINNNNCDSGLHCEACVADGNVRPRCTRIQPLNPLSKVKGLPFNRYSWLTTHNSFARLGEKSDTGSIVLAPSNQQDTVGSQLNNGVRGLMLDLYDFQNDIWLCHSFGGKCFNYTAFQPAINVLKEVRDFLEKNPTEIVTIIIEDYVTSRNGLNNVFNAAGLKKFWFPVARMPSDGRDWPTVDSMVKQNLRLVVFTSKSSKESTEGIAYEWKYLVENQYGTDGMKSGLCPSRAESAAMNTKSRPLVLMNYFPDTPDITQSCKHNSAPLISMLNTCHDLAGKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNNIAVCRPNMTFGVCNLPEAVAAPAPTTAGKSTTNAGSQLVRSDWLFGTGLMAITLSFVKLI | 410 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00848 | 410 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 76 | 182 | - | - | |
| Sain12g00848 | 410 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 66 | 333 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Sain12g00848 | 410 | CDD | PI-PLCc-At5g67130-like | 67 | 341 | - | - | |
| Sain12g00848 | 410 | PANTHER | UNCHARACTERIZED | 37 | 354 | IPR051057 | GO:0008081(PANTHER) | |
| Sain12g00848 | 410 | SUPERFAMILY | PLC-like phosphodiesterases | 71 | 345 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00848 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138845 | Sain12g00848 | Sain3g00667 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:21839726 | Sain5g01404 | Sain-Chr5:81399943 | dispersed | |
| Sain | Sain-Chr11:49252103 | Sain12g00848 | Sain-Chr12:21839726 | wgd | |
| Sain | Sain-Chr12:21839726 | Sain3g00667 | Sain-Chr3:19278488 | wgd | |
| Sain | Sain-Chr12:21839726 | Sain5g01412 | Sain-Chr5:81698327 | wgd |