Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00855 | ATGGATGACAACAACAGGGCCCTCCTGGCCCTACTTTCTTCCCTCCTATCGGAGCTCCTCCTCCTACTCTTTCTCATTCCCCCTCCCACCGCCGCCCCCTTTCCCCTCAATTCTCTCCTCATCCCTTTCATCTCCACTTCACAAACCGCCGCCACCCTTTCCCTCCTCTCCAACCGCCGCAAACGCCCCCGATCGCCGGAATCCGATGCACCTGCCGGAGAAACTACCCCCTCCAAACTCGGCCGTCGGGTCGGAGGATCCGACTCACCCATACCAAGAAACCCGGACTCCTTTAAACTCTATTTCAAGATGACTTCTTCAACGTTCGAGTGGCTCTCGGCTCTCCTCGAACCGCTGCTCGAGTGCCGTGACCCGGTTCACTCTCCCTTGAACCTTCCGGTCGAAACTCGACTCGGAATCGGACTGTTTCGACTCGCCACCGGTTCAGATTATTATGAAATTTCACGGCGGTTTAAAGTTTCGGAACCCGTAGCGAAATTTTGCGTCAAACAGTTTTGTCGCGTGTTGTGCACGAATTTCCGGTTCTGGGTCGGGTTCCCTAACCCGAACGAGATCCGATCAATTACTGAATCGTTCGAAAAATTAACAGGTTTGCCCAATTGCTGTGGAGTAATACATTGTACAAGATTTAATATTTTAAAGAACGAGGCTACTGAGGAACCAATTGCTGCTCAATTTGTGGTCGATTCCTCTTCAAAGATTCTCAGCATTATTGTTGCAGGATTTAATGGCAAAAAGGGTAATCATCTTGTTCTTAAATCATCAAGTTTGTATAAAGATATTCAATCAAAGAAAGTGTTAAATTCCCCACCTATAGATATAAATGGTGTATCTATACCTCAATATTTAGTTGGTGAAAAAGGGTACCCTTTTGTTCCATGGTTAATGGTTCCTTTTGATCAGCCTGTGGTGAATAATTCAGATGAAGATAAGTTCAATTGTGCACATAATTTGATGGTTGTTTCTGGGTTTAGAACAGTGGATAGTTTAAAAAAATGGGGTGTTTTGAGTAAGCCAATTAGGGAAGAGATGAAGACTATGGTGGGTTACATTGGTGCTTGTTCTATTCTTCATAATGCTCTGCTTATGAGGGAAGATTACTCTTCGTTATCCGATGAATATTTGCGAGAAACCGACGATAACCGTGGTGATTTTAGTTTTGAAGATAATTTAGTTGAAGAAAAGAGTTTTGAAATTAGAAGTGCATTGGCTACAAGAGCAAGAAGATGTTAA | 1254 | 44.34 | MDDNNRALLALLSSLLSELLLLLFLIPPPTAAPFPLNSLLIPFISTSQTAATLSLLSNRRKRPRSPESDAPAGETTPSKLGRRVGGSDSPIPRNPDSFKLYFKMTSSTFEWLSALLEPLLECRDPVHSPLNLPVETRLGIGLFRLATGSDYYEISRRFKVSEPVAKFCVKQFCRVLCTNFRFWVGFPNPNEIRSITESFEKLTGLPNCCGVIHCTRFNILKNEATEEPIAAQFVVDSSSKILSIIVAGFNGKKGNHLVLKSSSLYKDIQSKKVLNSPPIDINGVSIPQYLVGEKGYPFVPWLMVPFDQPVVNNSDEDKFNCAHNLMVVSGFRTVDSLKKWGVLSKPIREEMKTMVGYIGACSILHNALLMREDYSSLSDEYLRETDDNRGDFSFEDNLVEEKSFEIRSALATRARRC | 417 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00855 | 417 | PANTHER | UNCHARACTERIZED | 89 | 388 | - | - | |
| Sain12g00855 | 417 | MobiDBLite | consensus disorder prediction | 56 | 92 | - | - | |
| Sain12g00855 | 417 | Pfam | DDE superfamily endonuclease | 229 | 366 | IPR027806 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00855 | K23222 | nuclease HARBI1 [EC:3.1.-.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:22378262 | Sain11g00781 | Sain-Chr11:18583982 | transposed |