Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain4g00776	ATGGATTTTTCTCCGGCGGCTCGCCGGACGAGCAAAAAGCCGACAAGATCAGAGCTTTACTCAACGTTTGTAGTTCATAGCGACGAGGAAGATGACGAAGCACAACAGCAAAAAAACCCTAAAAAGGTAGATTCAGGGGACATATACGCTACGATGCTATGTAAAGAAGATGATGATCCAAATGATGACGAATCACTACCTCCTCTCCTCAAGCGGCTGCCAAAAGACTTCGGAGCCGCTGTGGATTCCGATGACGACGGAGAAAGCATCTCCGGCACAATGATTGTAAAAACTGGCCGTAGTCGCGTGCAAGCTCTGTATAGGAGAGAGGAATTCGATGAAGAAGACGATGACGATGAAGACGGCGGCGGCTTTGGGACGTTTGTGGTTAGATCGGAGGAAAGGGAGTATGAATCAATATCGGGGACAGTGGTGCGGCGGACTAGTGACGGAATGTCAACGATGAGTAGGGCGGTGGCTAGTATGCATGCGGTAGGAGAAGGATTTGGGAAGCCAAGGAAGGGGAGTGGTACGCCGACGTCATCTTCACAGGATGAAGAAGGAGGGTATTCACGGCGGCAGACAAGCAAAATGTCTTCCGGTTCGATTGCAGATAGTATTACGAGAGAAGATCCATCTACCAAGTACGAATTGCTTCATGAACTTGGAAAAGGTTCTTATGGGTCTGTTTACAAAGCACGTGATTTAAAAACTTCGGAAATGGTTGCAATCAAAGTGATATCATTATCTGAAGGGGAAGAAGGGTATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCTAATGTTGTTCGATACCTAGGAAGTTACCAGGGTGAGGAATACCTCTGGATTGTAATGGAGTACTGTGGTGGAGGAAGTGTTGCTGATTTGATGAATGTTACCGATGAGCCTTTAGAGGAGTACCAAATAGCATATATATGTAAGGAAGCATTAAAGGGTTTATCCTATTTGCACTCAATCTTCAAAGTGCATCGTGATATTAAGGGTGGTAATATCTTGTTGACTGAACAAGGAGAGGTCAAGTTGGGTGATTTTGGTGTTGCTGCACAGCTGACAAGGACAATGTCCAAACGTAATACGTTTATTGGTACTCCCCATTGGATGGCTCCTGAGGTTATCCAGGAGAGTCGATATGATGGGAAGGTAGATGTCTGGGCCCTTGGGGTGTCTGCAATCGAAATGGCTGAGGGACTTCCTCCAAGATCAAATGTGCACCCAATGAGGGTGTTATTTATGATATCCATCGAACCCGCTCCAATGCTTGAAGATAAGGAGAAATGGTCTCTTGTGTTCCATGATTTCATTGCAAAATGCCTTACAAAAGACCCTCGTATTCGTCCCACTGCATCTGAGCTGCTAAAGCACAAGTTTATAGAAAAATGCAAAACTGGAGCTTCTGCAATGTTACCCAAGATTGAGAGGGCAAAGCAAAATAGGGCGTCTATGGCATTGGAAGCAGAAAATGTTGTTGCAGAGACCGTACCCGGATACGGGACACTGGGACCAAAAATGAATGAAGACTTTGGAGATACTGTTCCATCCAAACCTCATCAAGTGCCTAATGGAGTACCTGTTGTAGATGGTTCAGTACAAGCTGATGGTTTGGAAGATTCTGGAGAAGGTGATTTCGGAAGTGTCATAATTCATGGTGGCGTAGGTATAGATAAGACAGCTGCTAAACCACCTGTTCCAACAGCAAAGGAGCTCTCAACGTCTTCAGCACATGGCCAAATTTCGTCAATTGCTGATCCTGGAGAAGATTCAGTTAGTCCATGGGTGACCAAGAAAGTTGGTGCATCCACAGATACATTTCGTATTGTTGAATCACCAGCTACCGAACACAAAACACAAGCTATTGGAAGCAGTGGTGCTGCCATCAGTGGCACAACTAAGAAAGACACTGTTAACCGCAAAGCACTAGACAAGCTGTGGTCTATATATGCCGCTGGAAACACAGTGCCGATTCCATTTTTGAGGGCAACTGATATATCTCCCATTGCATTATTGTCGGAGAATGTGCTTGGAAGTCAGCATGTGGATAACGTTGGAAGTGTAGCTGTAGAAGCATTGCAAGATCTTTTCACGAGCGATGGACAGTCTAAGAAGGGCCGAAGGCAAAATGAGCTGCCTCTTCCTCCGAGTGTATACCAGAGACTCACATCAAGTCCAACATTGATGAATCTCACACAGGCTTTGTCATACCATAAGATGTGCTATGAAGAGATGCCACTGCAGGAGCTACAAGCAGCTCAAGAACAACAAACCATTCAGAACCTCTGTGATACCCTTCGAACTATTTTACGGCTATAG	2346	45.31	MDFSPAARRTSKKPTRSELYSTFVVHSDEEDDEAQQQKNPKKVDSGDIYATMLCKEDDDPNDDESLPPLLKRLPKDFGAAVDSDDDGESISGTMIVKTGRSRVQALYRREEFDEEDDDDEDGGGFGTFVVRSEEREYESISGTVVRRTSDGMSTMSRAVASMHAVGEGFGKPRKGSGTPTSSSQDEEGGYSRRQTSKMSSGSIADSITREDPSTKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEEYQIAYICKEALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKCLTKDPRIRPTASELLKHKFIEKCKTGASAMLPKIERAKQNRASMALEAENVVAETVPGYGTLGPKMNEDFGDTVPSKPHQVPNGVPVVDGSVQADGLEDSGEGDFGSVIIHGGVGIDKTAAKPPVPTAKELSTSSAHGQISSIADPGEDSVSPWVTKKVGASTDTFRIVESPATEHKTQAIGSSGAAISGTTKKDTVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQHVDNVGSVAVEALQDLFTSDGQSKKGRRQNELPLPPSVYQRLTSSPTLMNLTQALSYHKMCYEEMPLQELQAAQEQQTIQNLCDTLRTILRL	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain4g00776	781	Gene3D	Transferase(Phosphotransferase) domain 1	212	506	-	-
	Sain4g00776	781	PANTHER	SERINE-THREONINE-PROTEIN KINASE TAO	172	499	IPR050285	GO:0006468(PANTHER)\|GO:0035556(PANTHER)\|GO:0043408(PANTHER)
	Sain4g00776	781	SUPERFAMILY	Protein kinase-like (PK-like)	215	471	IPR011009	-
	Sain4g00776	781	FunFam	Aurora kinase A	208	297	-	-
	Sain4g00776	781	ProSiteProfiles	Protein kinase domain profile.	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Sain4g00776	781	SMART	serkin-6	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Sain4g00776	781	Pfam	Protein kinase domain	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	108	131	-	-
	Sain4g00776	781	ProSitePatterns	Protein kinases ATP-binding region signature.	222	245	IPR017441	GO:0005524(InterPro)
	Sain4g00776	781	CDD	STKc-MAP4K3-like	215	470	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	573	601	-	-
	Sain4g00776	781	Coils	Coil	484	504	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	23	40	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	1	15	-	-
	Sain4g00776	781	FunFam	serine-threonine-protein kinase dst1 isoform X1	213	504	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	175	209	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	166	210	-	-
	Sain4g00776	781	MobiDBLite	consensus disorder prediction	1	47	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain4g00776	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4673966	Sain	Sain3g00086	Sain-Chr3:1778590	Sain4g00776	Sain-Chr4:21668157
	4677935	Sain	Sain4g00776	Sain-Chr4:21668157	Sain9g00264	Sain-Chr9:6390477
	4699038	Sain	Sain4g00776	Sain-Chr4:21668157	Sain12g00337	Sain-Chr12:6129630

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sain3g00086	.	1	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	63.3	0.0	851.0
	Sain4g00776	.	5	836	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	61.256	0.0	919.0
	Sain5g01811	ACH	6	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	62.281	0.0	847.0
	Sain6g00501	ACH	4	683	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	58.046	0.0	751.0
	Sain8g02196	ACH	8	672	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	62.737	0.0	851.0
	Sain9g00264	ACH	4	683	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	59.286	0.0	783.0
	Sain10g00336	.	5	476	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G14480	52.465	1.07e-164	474.0
	Sain10g02720	ACH	63	262	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G53165	24.771	8.02e-08	53.9
	Sain10g03149	.	40	709	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G10730	65.537	0.0	924.0
	Sain11g04725	.	254	500	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	27.562	5.77e-19	90.5
	Sain12g00337	.	1	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	60.623	0.0	780.0
	Sain15g00447	.	103	231	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	82.946	1.27e-79	246.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Sain	Pkinase	1.3e-69	CL0016		PK	STE_STE20-Pl