AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain4g00779 ATGGACTTCTGGGTGGTTGCAGCCGCTACCGGTGCCGGTTACGTGGCCAAGCACTGGCAGAACCTATCAAGTGAGAAAGATGGCTCATCGAACCCGTCACCTACACCATCACCACGACTGCAACCAGACACATGTCAAGTGTTGGGCAAAATCCCCAACTCGCTTTTCCCACCGCCAGTTTTTATAGAGAAACAAGTACTTCAAGATGATACCGACGAAATCAAAGGAAAACACGACTACTCTGACACTTCAGGCCATCGTTTACATGAATTCAGAACCAATAACACGAATAGCAAATCATTCTCGAGTCTGAGACCCTTAGTGGTAACCAGTAACGGCAGAGATTCCGGACGAAAACAGACACAACTTGATGATATAAAAGAGCATAAGATCGTGTTCATGGATGAAATTGCAGCATCCGTGGAAGCATCATTGTTTGAACCAGATGAATCAGTCAAGCTTCCAAGAAGACCAAAACAAATGTATTTCAAGAGATTTGAAACAGGCAACGATATTGTTACCTTGTTCCTCGGGATTACAATTGGAATATTATCGACTAATGTGAATAATCAACATGAAGTTGAGCATCTAAACGAGCTGCTAGAAGAAGCTGAAACTATGGTTCAAGATTTACACAACAAACTTGAAACGAAAGATGGGATTACTGGAAAGGAGCAGGGCACTGAGGCAAATAAAACTGCAACCGATAGTCCAAAAGCCGACAACTTTGAGTTAACAAGTGACATCGAGGCCGAGCTTGAGGCCGAGCTTGTGAGATTGGAACAAAATATGACTAACGTTGTGGAGGTTGATTCAGACATTGAAGCAGACATGGCTAGAGGAGACTTTAACCTAGATGCACTCACCTGGCAACTTGATAGCCGATCTGAATCGGACCACAGTGACAAAAGTGAAAGCAGCGGCAGACCTGATTTCACTCCAAACTATGCAGTTTCGCCACTGGACTTACGGCTACGCCTTCATCAACTAATCGAGTCAGAACTCCGAGCTCGTATCGAGGAGCTCGAGGCAGTTCTCGAGAACCAAAACAGCCAAAGTAAGCCTAATTCTCCAGACCCACAAGAAGAAAACTCTTTCTGGGACTTCGATCACACCAGAATGGAATCTTCTTCATCAACCCCTTAA 1146 44.59 MDFWVVAAATGAGYVAKHWQNLSSEKDGSSNPSPTPSPRLQPDTCQVLGKIPNSLFPPPVFIEKQVLQDDTDEIKGKHDYSDTSGHRLHEFRTNNTNSKSFSSLRPLVVTSNGRDSGRKQTQLDDIKEHKIVFMDEIAASVEASLFEPDESVKLPRRPKQMYFKRFETGNDIVTLFLGITIGILSTNVNNQHEVEHLNELLEEAETMVQDLHNKLETKDGITGKEQGTEANKTATDSPKADNFELTSDIEAELEAELVRLEQNMTNVVEVDSDIEADMARGDFNLDALTWQLDSRSESDHSDKSESSGRPDFTPNYAVSPLDLRLRLHQLIESELRARIEELEAVLENQNSQSKPNSPDPQEENSFWDFDHTRMESSSSTP 381
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain4g00779 381 MobiDBLite consensus disorder prediction 294 317 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 226 240 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 347 363 - -
Sain4g00779 381 Coils Coil 332 352 - -
Sain4g00779 381 Coils Coil 187 217 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 75 99 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 216 240 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 75 93 - -
Sain4g00779 381 PANTHER EMB|CAB62613.1 1 352 IPR040348 GO:0008356(InterPro)
Sain4g00779 381 Coils Coil 243 270 - -
Sain4g00779 381 MobiDBLite consensus disorder prediction 347 381 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain4g00779 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4677938 Sain Sain4g00779 Sain-Chr4:21773522 Sain7g01277 Sain-Chr7:97741387