AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g01977 ATGGTAGTAGCGAAGCTGCTGAGTCTCCTCCCATCCAAATTGGAAACCAAATCTCCGTCTCTCCATCATCATCATCATCATCATCATCATCATCAACAACAACCATGTGGATGGGGATTAGAAAAGATGAAGAAGAGCCGACGTGGCATCTCTCTTGCTGCAATCAAGCCTGTGGTTGTAGTTGCAGAGGCCGCCGGCGTGGGTTATTCAAGTGCTAGCTATTACACCTCTCTGGGTCTCTTCGTCATTTCTGTACCGGGTCTCTGGTCCCTCATCAAGCGCTCCGTTAAATCCAAGGTGGTGCAAAAGACATTTATACAGGAAGAAAAGAAGAAAGAGCCTAACCAGGTGGCTGGAGAGATTCTTTCCTTCTTCACCCGCAACAATTTCTTGGTCTTGGATAAAGGAGAGACCATCACGTTCCAAGGCACGATGGTTCCGAGCAGAGGGCAAGCGGCACTCCTCACATTCTGCACCTGTATCAGCATGGCAAGTGTAGCCCTGGTGCTTACCATCACCGTCCCTGATGTCGGTAACAATTGGTTCGCCCTCACCCTTCTCAGTCCATTAGCAGGAGCGTATTACTGGAAACGAGCATCAAGAAAAGAGCAGATCAAGGTGAAAATGACCATGGCAGAAGATGGCACCTTGTCAGAGATAATTGTTCAAGGCGATGACCAGCAAGTTGACCAGATGAGAAAGGAGTTGCAGCTCACTGAGAAAGGCATGGTTTATGTCAAAGGCATCTTCGAGAGATAG 759 48.35 MVVAKLLSLLPSKLETKSPSLHHHHHHHHHHQQQPCGWGLEKMKKSRRGISLAAIKPVVVVAEAAGVGYSSASYYTSLGLFVISVPGLWSLIKRSVKSKVVQKTFIQEEKKKEPNQVAGEILSFFTRNNFLVLDKGETITFQGTMVPSRGQAALLTFCTCISMASVALVLTITVPDVGNNWFALTLLSPLAGAYYWKRASRKEQIKVKMTMAEDGTLSEIIVQGDDQQVDQMRKELQLTEKGMVYVKGIFER 252
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g01977 252 Pfam Cofactor assembly of complex C subunit B 73 238 IPR021919 -
Sain8g01977 252 PANTHER - 11 252 IPR021919 -
Sain8g01977 252 MobiDBLite consensus disorder prediction 19 33 - -
Sain8g01977 252 MobiDBLite consensus disorder prediction 17 37 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g01977 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:52193603 Sain8g01977 Sain-Chr8:132375782 dispersed