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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g01990 ATGGAGACGGATGGGTCCTCCATGAATACGATGGATGGGAAAGAGAATGAGAATGAGAATGATATAGAGTATGTGAGCTATGGAGGAGAGCATCACTTGCCCCTTATCATGCGCCTCGTTGATGAAGAACTCAGCGAACCCTACTCCATCTTTACCTATCGTTACTTTGTCTATCTCTGGCCCAATCTCTCCTTCCTTGCTTTTCACAACGGAAAATGCATCGGAACCGTCGTTTCTAAGATGGGCGAGCACCGTAACACTTTCAGAGGCTACATTGCTATGCTCGTCGTCCTCAAACCTTACCGTCACAAGGGCATTGCTACAGAACTTGTTACCAGATCCATTAAAGTGATGATGGAATCAGGTTGTGAAGAGGTAACCTTAGAAGCAGAAGTTACAAATAAGGGAGCGCTTGCATTATACGGCCGCCTTGGGTTTATAAGAGCAAAACGGCTATTTAGATACTACTTGAACGGTGTCGATGCTTTCCGACTGAAGCTTTTATTTCCCCATCCAGAATTACCGCCCTCCCACTCAGTGATGTCATCAGTCCTTGAGAGTTATGGAGCAAACGAAATGGCGCCCCCAAAGAAAGAATGGTCCCCGAGTGAAGTTTAG 618 46.12 METDGSSMNTMDGKENENENDIEYVSYGGEHHLPLIMRLVDEELSEPYSIFTYRYFVYLWPNLSFLAFHNGKCIGTVVSKMGEHRNTFRGYIAMLVVLKPYRHKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHPELPPSHSVMSSVLESYGANEMAPPKKEWSPSEV 205
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g01990 205 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 170 IPR000182 GO:0016747(InterPro)
Sain8g01990 205 FunFam N-alpha-acetyltransferase MAK3 isoform A 29 181 - -
Sain8g01990 205 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 12 173 IPR044542 GO:0004596(PANTHER)|GO:0004596(InterPro)|GO:0017196(PANTHER)|GO:0017196(InterPro)|GO:0031417(PANTHER)
Sain8g01990 205 Gene3D - 29 183 - -
Sain8g01990 205 Pfam Acetyltransferase (GNAT) family 36 146 IPR000182 GO:0016747(InterPro)
Sain8g01990 205 CDD NAT-SF 64 129 - -
Sain8g01990 205 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 172 IPR016181 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g01990 K00670 N-alpha-acetyltransferase 30 [EC:2.3.1.256]
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Sain Acetyltransf_1 1.1e-16 CL0257 TR GNAT