AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g01992 ATGGGGGCATATGAGTCTCTACCACTAACCGACGACGAACAACACCAAGAACAAGAACAAGAAGATATAAATCCCAAGAACGAAGAAACAAGAAAGTTATTGAGTAAACAAGACGACGAGGACAAGGATGCGATCATGAACAAGAATCTGCAAGAACAAGATCGCAATAATGAAATTGACCCATCCATCACCCCATCTCATGTACCACGTGCCTTCTCATTGGAATCACTCAATGATGATCCAACCATCACCGACCTATACATCATATGCCACGGAGAATGTCACATCAACTTAAGGCCCGATCTCGTCGGTGGTCGCTGTCCTGAGGCTGCACTAACGCCAAACGGCAAGAGGCAAGCAAGAGCATTGGCCGTCTTCTTGAAATCGCAAGGGATAAGATTTGATGCCGTTTACACCTCACCATTAGATCGGGCTCGAGCAACAGCAGTTCCCGTATGTCAGGAGATGAATTTTCCAGAGCAGATGATCGAAACCTCAAACGCGTTACAGGAAATAAGTCATGGAGTTTGGGAGGGGTGCCAACAATCGGATGTATATACCCCTTCTGTTTTAAGCTTAATGGAAAGATTCCAACCTGATTTTTGTGCTCCATCTGGTGAAACACTGAGGCATGTAGAATTCCGAATAATCCAATTCTTAAATGCAACAGTCGACCCTCAAAAGTCGTTGTCCATCATTGATTTTGTTCCTCCAATCGCTACACCCCCGCCAAGGCCACCAAGACAATTAGGATTTCCAAAAAAAAAGTCGAGCAAAAGCCAACTAGAAATGGTGTGCACGGGTGGCGGAGGGGGAGGAGATCAAGAGGCTGACGATGAGATGTCCCCTCGGGTGCCTACGGATTATAGCAAGCAACCCGATCAACATCCTGAAATATTACTATTGAGTAGTATGAAAAGAAGTAGCCATAAACCAACAGCTCTTCCATTGCCATTGGCTGCTTCTTCTTCTTCTTCTTCATGTTGTAATAAGTGTATAGGTATATTTAGTCACTCCATACCTATCAAGTGTCTGGTTACAGGTATCCTTGGTTGTAGTCCAATCATGTCCAACAAGATTTGCATACAAGATTCATCAGTCACAGTGTTGCAACATTCAGGGAAAATGGGTTGGCGGATTAAAAGACTCAATGATACTTGTCATCTTAGGCTTATGTAG 1179 44.11 MGAYESLPLTDDEQHQEQEQEDINPKNEETRKLLSKQDDEDKDAIMNKNLQEQDRNNEIDPSITPSHVPRAFSLESLNDDPTITDLYIICHGECHINLRPDLVGGRCPEAALTPNGKRQARALAVFLKSQGIRFDAVYTSPLDRARATAVPVCQEMNFPEQMIETSNALQEISHGVWEGCQQSDVYTPSVLSLMERFQPDFCAPSGETLRHVEFRIIQFLNATVDPQKSLSIIDFVPPIATPPPRPPRQLGFPKKKSSKSQLEMVCTGGGGGGDQEADDEMSPRVPTDYSKQPDQHPEILLLSSMKRSSHKPTALPLPLAASSSSSSCCNKCIGIFSHSIPIKCLVTGILGCSPIMSNKICIQDSSVTVLQHSGKMGWRIKRLNDTCHLRLM 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g01992 392 Gene3D - 81 233 IPR029033 -
Sain8g01992 392 MobiDBLite consensus disorder prediction 10 55 - -
Sain8g01992 392 CDD HP-PGM-like 86 171 IPR013078 -
Sain8g01992 392 PANTHER PUTATIVE-RELATED 63 229 - -
Sain8g01992 392 SUPERFAMILY Phosphoglycerate mutase-like 84 390 IPR029033 -
Sain8g01992 392 SMART PGAM-5 85 345 IPR013078 -
Sain8g01992 392 Gene3D - 318 391 IPR029033 -
Sain8g01992 392 MobiDBLite consensus disorder prediction 1 67 - -
Sain8g01992 392 Pfam Histidine phosphatase superfamily (branch 1) 86 225 IPR013078 -
Sain8g01992 392 MobiDBLite consensus disorder prediction 266 293 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g01992 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138220 Sain11g01564 Sain8g01992
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr11:39243370 Sain8g01992 Sain-Chr8:133256058 dispersed