AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g01995 ATGAACCCACAACCTTCTCCTTCTTCCTCCTCCGATCACCCACCCAATTATCCGGCGACTCACGTCATGGATACACCTATGCCGCCTTCCAACCCTTACGTTCAATATACCGCTCCTCCACCTCCACCTCCCAACAACAACAACAACCTGGATAATGTCCGTAAGAAGCTTAATATTTGGGGAAACAAGGCAGAAACCACCGCCACCAACATCTGGACCAATCTGAAAACTGGTCAATCTGTGACTGGATCGGCATGGGGGAAAATGAATTTGACGGCAAAAGCATTAACCGAAGGTGGATTCGAATCCCTGTACAGACAAAACTTCACGGTCTACCCCAACGAGAAGCTGAACAGGACTTTTGCGTGTTACTTGTCGACATCCACCGGACCAGTCGCCGGAACCCTCTATCTCTCCAATATTCATGTGGCTTTCTGTAGCGATCGGCCTTTGTCTTCCATCCAACCCAACGGCATGGAGTCGTGGATCTATTACAAGGTGATCATCCCATTGGAGAAGATAGCAACGGTGAATCCAGTTACGGTGACAGGGAAAAAACAAATAGACAAATACATCCAGATCTCCACCATTGATGCTCAAGATTTCTGGTTCATGGGTTTTGTCAACCACGAGAAAGCGTCAAAACATCTCCTCAACGGTGTCTCCACTGCCCCACGCTTGCCTTAA 687 48.33 MNPQPSPSSSSDHPPNYPATHVMDTPMPPSNPYVQYTAPPPPPPNNNNNLDNVRKKLNIWGNKAETTATNIWTNLKTGQSVTGSAWGKMNLTAKALTEGGFESLYRQNFTVYPNEKLNRTFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLSSIQPNGMESWIYYKVIIPLEKIATVNPVTVTGKKQIDKYIQISTIDAQDFWFMGFVNHEKASKHLLNGVSTAPRLP 228
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g01995 228 PANTHER GEM-LIKE PROTEIN 2 17 222 IPR037848 -
Sain8g01995 228 MobiDBLite consensus disorder prediction 32 47 - -
Sain8g01995 228 Gene3D - 101 222 IPR011993 -
Sain8g01995 228 SMART gram2001c 103 181 IPR004182 -
Sain8g01995 228 Pfam GRAM domain 105 217 IPR004182 -
Sain8g01995 228 MobiDBLite consensus disorder prediction 1 51 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g01995 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr6:79622111 Sain8g01995 Sain-Chr8:133597743 dispersed
Sain Sain-Chr8:68896634 Sain8g01995 Sain-Chr8:133597743 dispersed
Sain Sain-Chr10:158636428 Sain8g01995 Sain-Chr8:133597743 wgd