AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g01996 ATGGCGAACTTCACGATGATGAATTCTCTGCTAACACTCATCTTCCTCTTCCTGCTCTCATCTTCTTCGCTGATTGCCGCCTCCGATTCTCCATTCATCCTAGCTCACAAGAAAGCTACGCTCAACCGCCTCAAATCCGGCGCCGATAAAATCTCCGTCTCAATTGACATTTATAACCAAGGATCTGCGGCTGCATATGATGTTAGCCTCACCGATGATGGGTGGTCTTCTGACATATTCAGTATCATCTCAGGGAACACTTCAACCTCTTGGGAAAGGCTTGATGCTGGTGCTCTTTTATCTCACTCCTTTGAGTTGGAATCAAAAGTGAAAACCGTGTTTCATAGCTCACCAGCTGTTATTACATTCCGTGTCCCCACAAAGGCTGCCCTACAGGAGGCATATTCGACCCCACTTCTGCCTCTCGAAATCTTATCAGACAAGCCTCGGGAGAGTACACTTGATCTTGCTAAGAGGGCGTTGGCAAAGTATGGATCCTTAATATCTGTGATATCCATTGTGGTTTTATTTGTGTACCTGGTGGCGACTCCGTCCAAGTCGGGTGCTGCAAAGGGAAGCAAGAAGAAGCGTTGA 594 47.14 MANFTMMNSLLTLIFLFLLSSSSLIAASDSPFILAHKKATLNRLKSGADKISVSIDIYNQGSAAAYDVSLTDDGWSSDIFSIISGNTSTSWERLDAGALLSHSFELESKVKTVFHSSPAVITFRVPTKAALQEAYSTPLLPLEILSDKPRESTLDLAKRALAKYGSLISVISIVVLFVYLVATPSKSGAAKGSKKKR 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g01996 197 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 6 196 - GO:0005783(PANTHER)
Sain8g01996 197 Pfam Translocon-associated protein beta (TRAPB) 18 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g01996 K13250 translocon-associated protein subunit beta