Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain8g02015 | ATGGAAGATGAATATGCAAAACTTATTAGGAGAATGAACCCCCCCAGAGTTAAAATCGACAACAACACTTCTCCAGATGCAACACTTATCCAGGTTGAAAGTGTTAACAAGCATGGTATTCTACTGGAAGTTGTCCAAGTTCTTGCGGATTTAGATCTCATCATCAAAAAAGCATATATCTCATCTGATGGAGGCTGGTTCATGGATGTGTTCAATGTCATCTGCCAAGACGGAATCAAAATCAGAGATGAAGGAATGATCGATTACATAACAAAGGTGCTTGAAAATGATGCATTTTATGTTCCATCACTGAATGGTTCAGTTGGATTGAAACCTTCTGAAGATTACACCGCAATCGAATTAGCTGGAACAGATAGACCTGGTTTATTATCTGAAGTGTCTGCAGTTCTAACGGGCCTTGGATGTAACGTGGTCAATGCTGAAATATGGACCCACAATGCTCGAGCTGCAGCCGTGGTTCATGTCACAGATGATAACACCAGATGTGCAGTGGAAGACCCAAAGAGGCTCTCAACTATAGAAAAACTGCTTTCTAATGTTCTCAAGGGAAACAATGACTTGAAGGCTGCAAAAATGACACCTGGTTTCACACACAGACAGAGAAGGTTGCATCAGATCATGTTTGCTGAAAGGGACTACGAAAAGTCTGAACAAGAAGAAAAGGAAAATGGATCAAGGCCACAGGTTGCTGTTTTAGATTGTGCTGAGAAAGGTTACACGATTATTACTATGCGGTGTAGGGATCGGCCAAAGCTGTTGTTTGATACTATCTGCACTTTAACTGATATGCAATATGTAGTGTTCCATGGAGTGGTTCACACAGGGAAGATGGAAGCTTATCAGGAATATTATATTCGACATGTTGATGGGACCCCGTTAAGCTCAGAGGCAGAGCGAGAGCGTGTTATGCAATGTCTGGAAGCTGCAATTGAGAGGAGGACGTCTGAAGAGGCAGTAGAGCTAGAATTGTGCACAGAGGACCGTGTTGGACTTCTTTCTGATATAACCAGGATATTTAGAGAAAATAGTTTGTGTATAAAAAGAGCAGAGATTACAACTCAAGGTGGAAAGGCAAAGGACAAATTTTATGTGACGGACATGACTGGTAATGGCCCTGTGGACCCCAAGAGTATAGATTCCATCCGAAGAGAAATGGGGCAACACACGACGCTCGATGTTAGATGGAAGTGTAGTGAATTAGAGAAGCCACCACCTGAAGAAACAAAAACGAGCTTTCTGTTTGGAAACCTGTTCAGATCCTACTCATGA | 1290 | 42.17 | MEDEYAKLIRRMNPPRVKIDNNTSPDATLIQVESVNKHGILLEVVQVLADLDLIIKKAYISSDGGWFMDVFNVICQDGIKIRDEGMIDYITKVLENDAFYVPSLNGSVGLKPSEDYTAIELAGTDRPGLLSEVSAVLTGLGCNVVNAEIWTHNARAAAVVHVTDDNTRCAVEDPKRLSTIEKLLSNVLKGNNDLKAAKMTPGFTHRQRRLHQIMFAERDYEKSEQEEKENGSRPQVAVLDCAEKGYTIITMRCRDRPKLLFDTICTLTDMQYVVFHGVVHTGKMEAYQEYYIRHVDGTPLSSEAERERVMQCLEAAIERRTSEEAVELELCTEDRVGLLSDITRIFRENSLCIKRAEITTQGGKAKDKFYVTDMTGNGPVDPKSIDSIRREMGQHTTLDVRWKCSELEKPPPEETKTSFLFGNLFRSYS | 429 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain8g02015 | 429 | SUPERFAMILY | ACT-like | 323 | 394 | IPR045865 | - | |
| Sain8g02015 | 429 | ProSiteProfiles | ACT domain profile. | 118 | 201 | IPR002912 | - | |
| Sain8g02015 | 429 | Pfam | ACT domain | 119 | 166 | IPR002912 | - | |
| Sain8g02015 | 429 | CDD | ACT-ACR-2 | 117 | 190 | - | - | |
| Sain8g02015 | 429 | ProSiteProfiles | ACT domain profile. | 327 | 405 | IPR002912 | - | |
| Sain8g02015 | 429 | ProSiteProfiles | ACT domain profile. | 29 | 109 | IPR002912 | - | |
| Sain8g02015 | 429 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 403 | IPR040217 | - | |
| Sain8g02015 | 429 | SUPERFAMILY | ACT-like | 113 | 188 | IPR045865 | - | |
| Sain8g02015 | 429 | SUPERFAMILY | ACT-like | 25 | 94 | IPR045865 | - | |
| Sain8g02015 | 429 | CDD | ACT-ACR-3 | 246 | 320 | - | - | |
| Sain8g02015 | 429 | Gene3D | - | 114 | 190 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain8g02015 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr4:11830696 | Sain8g02015 | Sain-Chr8:134954839 | dispersed | |
| Sain | Sain-Chr6:50588529 | Sain8g02015 | Sain-Chr8:134954839 | dispersed | |
| Sain | Sain-Chr8:134954839 | Sain9g03690 | Sain-Chr9:203677714 | dispersed | |
| Sain | Sain-Chr10:158275447 | Sain8g02015 | Sain-Chr8:134954839 | wgd |