Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain8g02016 | ATGGGAACCGAGACTCCACCCAGATCTTCCGGTGAAATATCGGAACCCTTTCTCGACGAATCATCCTATTCCCAATCAGATTTAGAAGAAACCATACCCGAATGGAAAGATCAGATCACCTTCAGGGGTTTAGTTGTTAGTGCTTTGTTGGGGACGCTTTTTTGTATCATCACCCACAAGCTCAATCTCACCGTCGGGATCATCCCTTCTTTAAACGTCGCAGCTGGTTTGCTCGGATTCTTCTGTGTCAAATCATGGACTACTTTCCTCCAAAAGTTTGGCTTTTCTGTTCAGCCGTTCACCAGGCAAGAGAACACTGTTATCCAGACTTGCGTTGTTGCTTGCTATGGCCTTGCTTTCAGCGGCGGATTTGGGTCATATTTGCTTTCAATGGATGAAAGAACCTACAATTTGATTGGTGCTGATTACCCTGGTAATCGGGCGGAAGATGTTAAGAACCCAGGGTTATTGTGGATGATAGGTTTCATTTTTGTTGTCAGTTTTCTTGGCCTTTTCAGTCTTGTCCCACTTCGCAAGGTCATGGTAATGGATTATAAACTTACATACCCTAGTGGAACCGCCACGGCCATGTTGATAAATAGTTTTCACACTACTACAGGCGCTGAGCTTGCAAGGAAGCAAGTAAGCTCTCTTGGAAAGTATTTGAGCATAAGTTTTGTCTGGAGTTGCTTCAAATGGTTCTTCAGCGGTGTTGGGGATTCATGTGGTTTTGATAATTTTCCTAGTTTGGGCTTGATGCTGTTCAAGAACACATTTTACTTTGACTTCAGTCCTACTTATGTTGGATGTGGTCTTATTTGCCCTCACATAGTCAACTGCTCGGTTCTTTTTGGAGCTATTATATCATGGGGCGTTCTTTGGCCCTTCATTACTACACGTGCAGGGGATTGGTATCCAGCTGATCTTGGCACCAATGACTTCAAAGGTCTTTATGGGTACAAGGTATTTATAGCCATTGCCCTTATTCTTGGAGATGGTCTTTACAATCTGATTAAGATAATAGCCATCTCCATTAAGGCAGTGTGGAACAACAAAACCAAACATCAAGATCTCCCTGTAATGAAAGAGATTGTAGATTCTGATACTTCCAAATTGACATCCAAATCACAAGTTGAGGACCAGAAAAGAGATGCTGTTTTCTTAAAAGACAGTATACCGACGTGGTTTGCAGCCTCTGGGTATGTGGTCCTGGTTGGCATATCCATGGCCACGATGCCACTTATTTTTCCACCTCTGAAATGGTACCTGGTTCTGTGCTCTTACATTATTGCCCCTGCCCTTGCTTTCTGCAACTCGTACGGAACTGGTCTCACCGACTGGAGCCTGGCTTCAACATATGGCAAAATCGGCCTTTTCATCATCGCATCATTGGTCGGAACCAACGGGGGCGTCTTGGCTGGGTTAGCAGCATGCGGGGTCATGATGTCTATCGTCTCAACCGCTGCTGATTTGATGCAAGATTTCAAGACGGGTTACCTGACGTTATCGTCCGCTAAATCCATGTTTGTGAGCCAGTTAGTGGGGACCGCCATGGGATGCATCATCGCGCCACTCACGTTTTGGATGTTTTGGTGTGCGTTTGAGATTGGGACACCGGATAGTCCTTACAAGGCTCCGTATGCTGTGATATATCGCGAAATGGCGATTCTCGGAGTGGAGGGATTCTCGGAGCTCCCGAAGCATTGCTTGGGTTTGTGCTGCGGGTTTTTTGTGTTGGCGTTGGGTTTAAACTTGGTGAGGGATTGGTGTCCGCGAAAGGTGGCGGGGTTCATTCCGATTCCGATGGCAATGGCGGTGCCGTTTTATATTGGAGCTTATTTTGCTATTGATATGTTTGTTGGGACGGTGATTCTGTTTGTGTGGGAGCGGGTGAATAAGAAGGATGCGGAGGATTATGCAGGGGCAGTTGCTTCGGGTTTAATATGTGGAGATGGGATATGGACGATACCCTCAGCTATACTCTCGATTCTCAGGGTTGATCCACCCATCTGCATGTATTTCGGGCCTTCGGTTACCAAATGA | 2043 | 45.96 | MGTETPPRSSGEISEPFLDESSYSQSDLEETIPEWKDQITFRGLVVSALLGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFCVKSWTTFLQKFGFSVQPFTRQENTVIQTCVVACYGLAFSGGFGSYLLSMDERTYNLIGADYPGNRAEDVKNPGLLWMIGFIFVVSFLGLFSLVPLRKVMVMDYKLTYPSGTATAMLINSFHTTTGAELARKQVSSLGKYLSISFVWSCFKWFFSGVGDSCGFDNFPSLGLMLFKNTFYFDFSPTYVGCGLICPHIVNCSVLFGAIISWGVLWPFITTRAGDWYPADLGTNDFKGLYGYKVFIAIALILGDGLYNLIKIIAISIKAVWNNKTKHQDLPVMKEIVDSDTSKLTSKSQVEDQKRDAVFLKDSIPTWFAASGYVVLVGISMATMPLIFPPLKWYLVLCSYIIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASLVGTNGGVLAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCIIAPLTFWMFWCAFEIGTPDSPYKAPYAVIYREMAILGVEGFSELPKHCLGLCCGFFVLALGLNLVRDWCPRKVAGFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERVNKKDAEDYAGAVASGLICGDGIWTIPSAILSILRVDPPICMYFGPSVTK | 680 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain8g02016 | 680 | NCBIfam | OPT family oligopeptide transporter | 35 | 658 | IPR004813 | GO:0035673(InterPro) | |
| Sain8g02016 | 680 | Pfam | OPT oligopeptide transporter protein | 38 | 661 | IPR004813 | GO:0035673(InterPro) | |
| Sain8g02016 | 680 | PANTHER | OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED | 22 | 676 | IPR045035 | GO:0016020(PANTHER)|GO:0035673(InterPro) | |
| Sain8g02016 | 680 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain8g02016 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr10:160763336 | Sain8g02016 | Sain-Chr8:134958072 | dispersed | |
| Sain | Sain-Chr5:3878641 | Sain8g02016 | Sain-Chr8:134958072 | dispersed | |
| Sain | Sain-Chr8:134958072 | Sain8g03127 | Sain-Chr8:183228497 | transposed |