AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain8g02023 ATGAATTCGTTAGGTTGGATGCACAGAAAGTTGAGGCAAAACAACGACGAACAAAGCAGATATGCCTCAAGAAGGAAATCCTATTCTTGTTTCTCATCACTATGGAAGCTTGACGAGCAGCAATACTTTCCTGAAGCGAAAAACAATTCTGCACCTAGAGTGGAAGAAGTAAATGAAGAAGAAACAGTTGACATGAGCCATGAGTTCTTTCATGGCTTTCTTGCAATTGGAACTCTTGGTTCGGGATCAATTACTAAAGATCCCATGACACCAAAATTTGCAATGCCATTCGAAAATACAACCGAGGAAGAAACCAGGGCAGCAGAGAACGAATTGCAGTCTCCAAACAACAAGTTAGAGAAGCCAACTGATAATGAAGTAAGTTATGAATCATCTAAAGGGAGAGTGGTTACTTTAGATGATAAGGAAATCGATGGCATGGGTACCAAAGATAACAAAAGTACGGTTGTGCATCCACTGAAAGAGTCTTCTGAAATGCCGGCAACCAAAGAAAAAACAAAGGAACAAAAGACTACGCCTGACAACTTTCCCGCGAAAAATGCCACATCCTACAAGAAATCGGAAAAATTAGACAAAGGGGAGAAAAGAGAAACTAGTGCTTTGCATTTTATGAAGAAAATGCTGAAAAAACTTGATTTCGCATCAGGGTGTAACCCAACTTCTGCTAGTGGTAATGCTATCTTTTGTGATTCAACTGAGAAGAAACCCACGAAGGTCTTTTGGAAGTCAAGAAAAATCCACCCTGAAGCACCTGGTCTTCATGTCAACAAGTCACACAACTATGAGTTCAAGAAGTTGTGTTATGATAAAGAAGCGAAATTAGAGGATGAAGACAACAAGTATCCTCATATGGGAATGTTAAAGAAAGAAATAGTTGGCAGCACCATGTTTGCCAACAGGCCTCACAAAAGCCAACCAGCTGGCAAAAAAGCACACTGGATTAAAACCGATGCAGAATATTTGGTGCTGGAGTTTTAG 999 40.14 MNSLGWMHRKLRQNNDEQSRYASRRKSYSCFSSLWKLDEQQYFPEAKNNSAPRVEEVNEEETVDMSHEFFHGFLAIGTLGSGSITKDPMTPKFAMPFENTTEEETRAAENELQSPNNKLEKPTDNEVSYESSKGRVVTLDDKEIDGMGTKDNKSTVVHPLKESSEMPATKEKTKEQKTTPDNFPAKNATSYKKSEKLDKGEKRETSALHFMKKMLKKLDFASGCNPTSASGNAIFCDSTEKKPTKVFWKSRKIHPEAPGLHVNKSHNYEFKKLCYDKEAKLEDEDNKYPHMGMLKKEIVGSTMFANRPHKSQPAGKKAHWIKTDAEYLVLEF 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain8g02023 332 MobiDBLite consensus disorder prediction 135 149 - -
Sain8g02023 332 MobiDBLite consensus disorder prediction 100 203 - -
Sain8g02023 332 PANTHER PROTEIN LAZY 1 1 331 IPR038928 GO:0009630(InterPro)|GO:2000012(InterPro)
Sain8g02023 332 MobiDBLite consensus disorder prediction 164 179 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain8g02023 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr4:9885178 Sain8g02023 Sain-Chr8:135257267 dispersed
Sain Sain-Chr10:157922260 Sain8g02023 Sain-Chr8:135257267 wgd