AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain8g02041 | ATGGTTCGGGTGAAAGAAGCGATCGTCACTTTTTTCAACAACAGATGGCTGGTTTTTGTGGCGGCAATGTGGATTCAATCTTGCGCCGGCATCGGCTACCTGTTCGGGAGTTTATCGCCGGTGATTAAGAGCTCATTAAACTACAATCAGAAGCAGGTTGCAAGATTGGGTGTGGCTAAGGATCTCGGTGATGCTGTTGGGTTTTTGGCCGGAAGTTTGTCGGAGATACTGCCGATGTGGGGCCTTTTGCTTATCGGTGCTATTCAGAACTTTGTTGGGTATGGATGGGTCTGGCTCATCGTCACCGGTAAAGCTCCGGTGTTGCCATTGTGGGTTATGTGTCTTCTCATATTCATCGGAACCAATGGTGAATGTTACTTCAACACAGTAGCGTTGGTTTCATGCGTTCAAAACTTCCCCAAAAACCGCGGGCCCGTTGTCGGAATACTAAAGGGATTTGCAGGTCTGGGCGGTGCAATATTGACACAGATATACGCGTTAGTAAACTCACCCGATAACGCCTCCCTTATATTCATGGTTGCTGTGGGCCCTTCTATGGTCATTATCGCTCTTATGTTTATCGTGAGGCCAGTTGGAGGTCATAGACAACTCCGATTATCAGATACATCGAGTTTCTCGCTAATCTACTGCGTGTGTCTCGTTTTAGCCGCTTACTTGATGGGGGTTATGCTTGTGGAAGATTTGGTTGATCTGAACCAGACCATAGTCCAAATTTTCACAGCCATTTTGTTTGTGCTTATAGTGGTTCCAATCGGGATTCCTTTATGGTTAACTTTTTCTTCGGATCCACGAACCCCTGAAGAAGAATCTCTACTTTCCGAGCCACAACCCCAAAGATTATTAGAGCATGATCCGAATGAGATCATATTTAGTGAAGTGGAAGACGAGAAACCGAGGGAAGTTGACCTTCTTCCGGCTTCAGAAAGGCAAAAGAGGATTGCTCAACTTCAATCAAAGTTGGCTCAAGCGGCTGCAGAAGGAGCGGTGAGGATCAAGAGGCGAAGAGGGCCACATAGAGGCGAAGACTTTGATCTCACACAGGCTTTGATCAAGGCTGATTTTTGGCTCATCTTTACAGCACTTCTATTGGGATCTGGTTCTGGTTTGACGGTGATCGACAATTTGGGTCAGATGAGCCAGTCTTTAGGATACGATAACACGCATATATTCGTTTCCATGATCAGCATTTGGAACTTTCTAGGCCGGGTTGGCGGAGGCTATTTCTCCGAGATTGTTGTCAGGGACTATGCTTACCCAAGACCAGTAGCCATGGCTGTAGCCCAAGCCATAATGGCAGTTGGGCATTTGTTTTTTGCCATGGGTTGGCCTGGTGCGATGTACATCGGCACCCTTTTGATTGGTCTAGGCTATGGGGCTCACTGGGCTATTGTACCGGCTACAGCCTCTGAGCTATTTGGGCTCAAGAAGTTTGGAGCTTTGTACAATTTCCTCACCCTGGCTAACCCTGCCGGTTCACTAGTCTTCTCGGGTCTTCTTGCCAGCTATATATACGACTCTGAAGCAGAAAAACAAGCTCAACAACGCCATCAATTCGTTACAAATTCCACTTCTTTTTTGACAAAGCTTTTTGACACGGATGATGATGATGCTCTCAAATGTGAAGGTTCGGTTTGCTTCCGTCTGACTTACATGATAATGTCGGGACTCTGTATCATAGCGCTTATCCTAAGTTTGATACTCGTTCGCCGAACTAAGGTCGTCTACCAGAACCTTTACGGGAAAACCCGATCTTAA | 1776 | 46.57 | MVRVKEAIVTFFNNRWLVFVAAMWIQSCAGIGYLFGSLSPVIKSSLNYNQKQVARLGVAKDLGDAVGFLAGSLSEILPMWGLLLIGAIQNFVGYGWVWLIVTGKAPVLPLWVMCLLIFIGTNGECYFNTVALVSCVQNFPKNRGPVVGILKGFAGLGGAILTQIYALVNSPDNASLIFMVAVGPSMVIIALMFIVRPVGGHRQLRLSDTSSFSLIYCVCLVLAAYLMGVMLVEDLVDLNQTIVQIFTAILFVLIVVPIGIPLWLTFSSDPRTPEEESLLSEPQPQRLLEHDPNEIIFSEVEDEKPREVDLLPASERQKRIAQLQSKLAQAAAEGAVRIKRRRGPHRGEDFDLTQALIKADFWLIFTALLLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYFSEIVVRDYAYPRPVAMAVAQAIMAVGHLFFAMGWPGAMYIGTLLIGLGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLLASYIYDSEAEKQAQQRHQFVTNSTSFLTKLFDTDDDDALKCEGSVCFRLTYMIMSGLCIIALILSLILVRRTKVVYQNLYGKTRS | 591 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain8g02041 | 591 | CDD | MFS-Mch1p-like | 15 | 562 | - | - | |
| Sain8g02041 | 591 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 14 | 583 | - | GO:0016020(PANTHER) | |
| Sain8g02041 | 591 | Gene3D | MFS general substrate transporter like domains | 10 | 201 | IPR036259 | - | |
| Sain8g02041 | 591 | SUPERFAMILY | MFS general substrate transporter | 210 | 579 | IPR036259 | - | |
| Sain8g02041 | 591 | Gene3D | MFS general substrate transporter like domains | 357 | 589 | IPR036259 | - | |
| Sain8g02041 | 591 | SUPERFAMILY | MFS general substrate transporter | 5 | 202 | IPR036259 | - | |
| Sain8g02041 | 591 | Pfam | Nodulin-like | 15 | 261 | IPR010658 | - | |
| Sain8g02041 | 591 | FunFam | Nodulin family protein | 352 | 584 | - | - | |
| Sain8g02041 | 591 | Coils | Coil | 313 | 333 | - | - | |
| Sain8g02041 | 591 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 28 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain8g02041 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 140603 | Sain5g01914 | Sain8g02041 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr7:103278412 | Sain8g02041 | Sain-Chr8:136023339 | dispersed | |
| Sain | Sain-Chr7:113877213 | Sain8g02041 | Sain-Chr8:136023339 | dispersed | |
| Sain | Sain-Chr7:118755830 | Sain8g02041 | Sain-Chr8:136023339 | dispersed | |
| Sain | Sain-Chr8:136023339 | Sain9g00242 | Sain-Chr9:5843275 | dispersed | |
| Sain | Sain-Chr13:15209329 | Sain8g02041 | Sain-Chr8:136023339 | wgd | |
| Sain | Sain-Chr5:95172078 | Sain8g02041 | Sain-Chr8:136023339 | wgd | |
| Sain | Sain-Chr6:11566240 | Sain8g02041 | Sain-Chr8:136023339 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Sain1g00876 | . | 4 | 564 | Nodulin-like gene family | AT4G19450 | 47.478 | 5.13e-167 | 485.0 | |
| Sain1g00879 | . | 330 | 447 | Nodulin-like gene family | AT4G19450 | 49.6 | 3.42e-32 | 119.0 | |
| Sain2g00483 | . | 9 | 338 | Nodulin-like gene family | AT4G08300 | 40.303 | 3.06e-88 | 268.0 | |
| Sain2g01341 | . | 7 | 558 | Nodulin-like gene family | AT4G19450 | 50.532 | 4.71e-165 | 479.0 | |
| Sain3g00986 | . | 13 | 84 | Nodulin-like gene family | AT5G07050 | 58.333 | 3.23e-23 | 88.6 | |
| Sain3g01051 | ACH | 3 | 198 | Nodulin-like gene family | AT3G43660 | 67.677 | 8.70e-96 | 275.0 | |
| Sain3g01052 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 67.839 | 2.40e-97 | 280.0 | |
| Sain3g01053 | . | 2 | 198 | Nodulin-like gene family | AT3G43660 | 66.834 | 1.44e-94 | 272.0 | |
| Sain3g01056 | ACH | 13 | 198 | Nodulin-like gene family | AT3G43660 | 69.792 | 1.32e-95 | 275.0 | |
| Sain3g01935 | . | 1 | 340 | Nodulin-like gene family | AT4G30420 | 50.292 | 2.68e-123 | 358.0 | |
| Sain3g03322 | . | 6 | 361 | Nodulin-like gene family | AT5G40230 | 46.089 | 1.16e-96 | 289.0 | |
| Sain4g00162 | . | 8 | 375 | Nodulin-like gene family | AT1G70260 | 44.173 | 1.45e-106 | 315.0 | |
| Sain4g00163 | . | 17 | 364 | Nodulin-like gene family | AT5G40230 | 38.857 | 8.63e-72 | 226.0 | |
| Sain4g01305 | . | 1 | 566 | Nodulin-like gene family | AT2G39210 | 70.246 | 0.0 | 824.0 | |
| Sain4g01484 | . | 1 | 374 | Nodulin-like gene family | AT2G39510 | 57.895 | 1.59e-153 | 436.0 | |
| Sain4g01486 | . | 7 | 327 | Nodulin-like gene family | AT2G39510 | 60.372 | 4.89e-146 | 416.0 | |
| Sain4g01491 | . | 4 | 369 | Nodulin-like gene family | AT2G39510 | 49.593 | 2.96e-132 | 382.0 | |
| Sain4g02821 | . | 16 | 562 | Nodulin-like gene family | AT4G34950 | 69.873 | 0.0 | 792.0 | |
| Sain5g01914 | ACH | 7 | 578 | Nodulin-like gene family | AT5G14120 | 71.231 | 0.0 | 817.0 | |
| Sain6g00450 | . | 7 | 578 | Nodulin-like gene family | AT5G14120 | 60.485 | 0.0 | 709.0 | |
| Sain6g01855 | . | 12 | 198 | Nodulin-like gene family | AT3G43660 | 69.634 | 3.02e-96 | 276.0 | |
| Sain7g01135 | . | 1 | 389 | Nodulin-like gene family | AT1G75500 | 71.574 | 0.0 | 570.0 | |
| Sain7g01432 | . | 5 | 530 | Nodulin-like gene family | AT1G74780 | 59.316 | 0.0 | 605.0 | |
| Sain7g01583 | . | 109 | 561 | Nodulin-like gene family | AT4G19180 | 36.289 | 8.27e-92 | 295.0 | |
| Sain7g01753 | . | 7 | 579 | Nodulin-like gene family | AT5G14120 | 60.764 | 0.0 | 709.0 | |
| Sain7g01918 | ACH | 5 | 561 | Nodulin-like gene family | AT1G80530 | 61.854 | 0.0 | 702.0 | |
| Sain8g00995 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 58.031 | 0.0 | 847.0 | |
| Sain8g02041 | ACH | 6 | 579 | Nodulin-like gene family | AT5G14120 | 71.404 | 0.0 | 846.0 | |
| Sain8g02233 | . | 8 | 365 | Nodulin-like gene family | AT3G28050 | 42.623 | 1.82e-89 | 272.0 | |
| Sain8g02234 | . | 35 | 141 | Nodulin-like gene family | AT5G07050 | 38.532 | 9.39e-22 | 88.2 | |
| Sain8g02235 | . | 292 | 360 | Nodulin-like gene family | AT3G28050 | 49.296 | 1.47e-12 | 58.5 | |
| Sain8g02236 | . | 10 | 362 | Nodulin-like gene family | AT5G40240 | 43.417 | 3.59e-87 | 265.0 | |
| Sain8g02237 | . | 3 | 365 | Nodulin-like gene family | AT3G28050 | 64.595 | 4.05e-160 | 451.0 | |
| Sain9g00242 | ACH | 5 | 561 | Nodulin-like gene family | AT1G80530 | 60.428 | 0.0 | 684.0 | |
| Sain9g00807 | . | 15 | 389 | Nodulin-like gene family | AT1G75500 | 73.228 | 0.0 | 569.0 | |
| Sain9g01568 | . | 4 | 356 | Nodulin-like gene family | AT5G64700 | 44.759 | 4.52e-92 | 278.0 | |
| Sain9g02305 | . | 6 | 361 | Nodulin-like gene family | AT1G21890 | 55.556 | 2.97e-149 | 425.0 | |
| Sain9g03733 | . | 10 | 193 | Nodulin-like gene family | AT3G43660 | 23.629 | 2.61e-08 | 50.8 | |
| Sain9g04056 | . | 120 | 556 | Nodulin-like gene family | AT4G19180 | 28.444 | 1.18e-43 | 163.0 | |
| Sain10g00768 | . | 1 | 566 | Nodulin-like gene family | AT4G19450 | 60.984 | 0.0 | 634.0 | |
| Sain10g00820 | . | 7 | 357 | Nodulin-like gene family | AT5G45370 | 63.866 | 1.66e-161 | 454.0 | |
| Sain10g00824 | . | 8 | 385 | Nodulin-like gene family | AT3G45870 | 67.885 | 7.83e-170 | 478.0 | |
| Sain10g02016 | . | 8 | 367 | Nodulin-like gene family | AT2G37460 | 55.875 | 3.82e-153 | 436.0 | |
| Sain10g03178 | . | 9 | 364 | Nodulin-like gene family | AT3G30340 | 47.238 | 2.41e-119 | 348.0 | |
| Sain10g03378 | . | 15 | 342 | Nodulin-like gene family | AT5G45370 | 64.489 | 5.05e-165 | 464.0 | |
| Sain10g04330 | . | 22 | 368 | Nodulin-like gene family | AT5G40230 | 42.529 | 6.55e-87 | 265.0 | |
| Sain10g04480 | . | 102 | 584 | Nodulin-like gene family | AT4G19180 | 26.389 | 8.24e-42 | 158.0 | |
| Sain11g00778 | . | 6 | 374 | Nodulin-like gene family | AT2G39510 | 50.404 | 6.97e-135 | 388.0 | |
| Sain11g01494 | ACH | 9 | 563 | Nodulin-like gene family | AT2G28120 | 70.945 | 0.0 | 812.0 | |
| Sain11g04084 | . | 7 | 565 | Nodulin-like gene family | AT2G39210 | 66.37 | 0.0 | 774.0 | |
| Sain12g01126 | ACH | 3 | 198 | Nodulin-like gene family | AT3G43660 | 60.766 | 1.21e-89 | 260.0 | |
| Sain12g01127 | ACH | 1 | 198 | Nodulin-like gene family | AT3G43660 | 63.084 | 5.34e-95 | 274.0 | |
| Sain13g00380 | . | 7 | 554 | Nodulin-like gene family | AT1G80530 | 54.281 | 0.0 | 608.0 | |
| Sain13g01184 | . | 4 | 326 | Nodulin-like gene family | AT1G09380 | 52.941 | 4.29e-118 | 344.0 | |
| Sain13g01192 | . | 207 | 326 | Nodulin-like gene family | AT1G09380 | 50.833 | 4.43e-38 | 130.0 | |
| Sain13g01786 | . | 116 | 344 | Nodulin-like gene family | AT1G25270 | 39.256 | 1.14e-49 | 166.0 | |
| Sain13g01787 | . | 1 | 354 | Nodulin-like gene family | AT1G68170 | 38.418 | 1.53e-79 | 247.0 | |
| Sain13g01788 | . | 1 | 355 | Nodulin-like gene family | AT1G68170 | 39.071 | 1.26e-82 | 256.0 | |
| Sain13g01791 | . | 1 | 327 | Nodulin-like gene family | AT1G25270 | 44.848 | 5.21e-99 | 296.0 | |
| Sain13g01792 | . | 1 | 341 | Nodulin-like gene family | AT1G25270 | 41.813 | 1.81e-91 | 278.0 | |
| Sain13g01804 | ACH | 10 | 198 | Nodulin-like gene family | AT3G43660 | 60.891 | 1.38e-83 | 245.0 | |
| Sain13g01805 | . | 3 | 68 | Nodulin-like gene family | AT1G21140 | 61.972 | 2.52e-24 | 89.0 | |
| Sain13g01807 | ACH | 3 | 198 | Nodulin-like gene family | AT3G43660 | 61.321 | 2.06e-86 | 253.0 | |
| Sain13g02159 | . | 116 | 324 | Nodulin-like gene family | AT1G68170 | 46.19 | 1.86e-61 | 196.0 | |
| Sain14g00405 | . | 8 | 375 | Nodulin-like gene family | AT2G37460 | 61.995 | 1.03e-167 | 473.0 | |
| Sain14g00621 | ACH | 4 | 557 | Nodulin-like gene family | AT2G28120 | 65.054 | 0.0 | 744.0 | |
| Sain15g00030 | . | 1 | 327 | Nodulin-like gene family | AT1G09380 | 55.488 | 2.97e-131 | 378.0 | |
| Sain15g00329 | . | 12 | 389 | Nodulin-like gene family | AT5G07050 | 64.962 | 1.15e-176 | 497.0 | |
| Sain15g00343 | . | 12 | 389 | Nodulin-like gene family | AT5G07050 | 65.649 | 6.93e-177 | 497.0 | |
| Sain15g01102 | . | 6 | 494 | Nodulin-like gene family | AT2G30300 | 48.381 | 1.28e-152 | 444.0 | |
| Sain15g01103 | . | 6 | 494 | Nodulin-like gene family | AT2G30300 | 48.571 | 8.40e-154 | 447.0 | |
| Sain16g00615 | . | 18 | 362 | Nodulin-like gene family | AT5G40230 | 48.0 | 5.42e-104 | 308.0 | |
| Sain10000835.1g00003 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 56.51 | 0.0 | 793.0 |