Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain8g02064 | ATGTTAATGGGATCGACGACAAAAAACAAGAAAAGCCCGTATGTCCAACTTGATTATGTCATCAATCTTGTAGAGATTAAGCCTTGGCCTCCATCTCAGTCATTAAGATCACTTCGATCCGCATTGATACAATGGGAATACGATAACAAAATTTCAGGGTCTACTAAAGCAGTTACTCCTTCAATCGTTTCAGGTTTGAGTGTCGGTGACGGTAAAATTGAATTCAACGAATCTTTTAGGCTTCACGTGACGTTATCGAGAGATATGTCAATTAAGGCTGGAGACACCGAAACTTTCCTAAGGAATTGTATAGAGTTTAATTTGTACGAACCTCGAAGGGACAAAACGGTAAAAGGGCAGTTGTTGGCTACTGCAATCGTGGATTTTGCCGAGTATGGTATTGTGAAAGATAGTTTGATGATCAGTGTGCCTATGACATGCAAACGGACTTTTGGTAACACCGCTCAACCTATGCTCTTCGTTAAAATGCAGACTTCTGAAAGAAATAATCGTGTGAGGTCTTCATCGGGTGATGGCTTAATCAGAGAAGGATCGTTGGAGAAGAGCTATTCGGAGTCTGTTTCCGCTTTGATGAAAGAAGAGTATGCTGAGGAAGCCGAGAATGCTTCCGTTACCGATGATGATATTTCCTCCCAGTCTTCCATGGCTGCTGCTTCTTCAACCTTTGGATCCACTGGGAATTTAAGTCCTCAAAGAGAGAACGGATCAGAGGCGATATCTGGAAGCTCGAGAAACGTTAATGATCAAGAAGTGTTGGTTCAAGATAAAAGGGTCGCTGAATCCTTATCATCAACAGATTTGTATACTGAAATAATAAATGCTCGTACCACTCTATCAAATCTACGTAACTCAAGATTCACAATGCTACCAGAGAAAGCTGAATCTTACAACGTGAAACTATCAAAGTTGTCTATTGCTAATGATAACGGAAACTCTAGAAACGTAGCTTATGTCAATCTGCATGAGAAAGTTCCTAAAAGGGCCATGGAATCTCAGATGTATGAGGTGGACGATGAACAATCTTGTATACGGTTAAAAAATCCGAATGCAAGTCAAAGTGGACGAGAAAGTCAAATCATTGGAGATCTTGGATCAGATGTTTTACATGCTGATAGATTACAGAACACGAAGTCTGTTAGTTCTTCGTTGGATTCACGATATAGCAATGGATCAGACGTTTTACTTGATCGATTAAAGAATTTGAAGCCCGTTAGTTCTTCATTAGATTCCGGTTTTAGCAATGGATCAGACGTTTTACTCGATAGATTAAAGAATTTGAAGCCTGTTGGAGCTTCGTTGGATTCGGATTTTAGCAACGGGTCTGTAAGGAGTGGCAAAGTTTTAGACAAATTCAAAAAGGTCGGTGTAAGCAAGGTACAAGACTTGGAACAGAGGGTACAAGCTCTTGAAGGGGAGCTGAGAGAAGCTGCCGCTATTGAGGTTAGTCTTTACTCGGTAGTTGCAGAGCACGGGAGTTCCATTCATAAAGTCCATGCCCCCGCACGGCGTCTTTCTAGGCTGTACCTTCATGCATACAAAGAGAACTCTCAGTCTCGGAGAGCAACTTCAGGAAGAAGTATTGTGTCGGGATTGATTTTAGTCGCAAAAGCTTGTGGAAATGACGTTCCAAGGTTGACTTTCTGGTTATCAAACGCCGTTGTATTAAGAGCAATAATACACAAATCTTTTGAGAAAGAGCAAGCATCACTTTCTTCCGAAAAATCAAGTAAAACGAACGGTGTGATCATTGAGAACGGAACGAATGAGATCATATCTCCATTCAAATGGAAGAAAGAGTCTTCTATAAAAGAGAGTAGAATTGGTTCCAATGAATGGGAGGACCCTTGTATGCTTACTTCTATCTTGGAAAAAGTAGAATCTTGGATCTTTTCGCTCATTATCGAGTCCATTTGGTGGCAGACTCTTGCTCCTTATATGCAAACCACCGCTGCAAAGGGTATCGTTAGAAGAGTTGTAGATTCAGAATCTAATAAAACGTGTGAACCATCACCTGGTTCATACGATCACGAGAAAGTGAACTCCTCCTTGGAGCTTTGGAAGACGGCTTTCATGGAAGTTTGTGAAAGAATTTGTCCTGTTCGAGGTGCAGGACATGATTGTGGTTGCTTGCGTGTGCTATCTACGTTGATAATGAAGCAGTGCATGGGTAGATTAGATGTAGCCATGTTTAACGCCATTCTTCGGGAATCAGCTGACGAGGTTCCAACAGATCCTGTGTCGGACCCTATCAGCGATCCCAGGGTTCTTCCTATTCCATCAGGGAAAGCAAGCTTTGGAGCCGGTGCACAACTGAAAAAGACGATCGGAAACTGGTCCAGATGGCTCACCGAACTATTTGGCATTGAGATCAATGACTCTTTAACAGACGAGAATGAAGCCGACTACGATGAAAACCGAGAAGTTTACGATACATCCTTCAACTCTTTTCATCTCCTCACTGCACTGAGTGAGCTCATGATGCTTCCAAAAGATATGCTCTTAAGCAACACGATCCGGAAAGAGGTGTGTCCTAGTTTTGGTGTACCGTTAATAAAGAGGATTCTTGATGGTTTCGTGCCAGATGAGTTCTGCCCAGACCCTATTCCTGATGTGGTGCTTGAAGCCCTGGATTCAGAGGATTTACTGCAGAGCTGTGGCGAAGGTTGCGTGATGGGGCTCCCATGTGCCGCACCTCCTATCGTATATCATCCACCATCTGCATCTTTAATTGGATGCGACTTAGGAGACGATGGAAACCAGGCTCGGTGTGGATCTTCGATCCTACGCAAGTCAAATACGAGCGATGATGAACTTGATGAATTGGATTCACCGTTGACTTCGATCATTGACTCTTCTCGGACTGTAACCGCTTCAACAAAGCCGATCTGGGCGTTGAAAGATTGCGGGAGTCGCAATACCGTTAGGTATCAACTCCTTAGAGAGGTGTGGATGAATAACGAGTAG | 2985 | 42.88 | MLMGSTTKNKKSPYVQLDYVINLVEIKPWPPSQSLRSLRSALIQWEYDNKISGSTKAVTPSIVSGLSVGDGKIEFNESFRLHVTLSRDMSIKAGDTETFLRNCIEFNLYEPRRDKTVKGQLLATAIVDFAEYGIVKDSLMISVPMTCKRTFGNTAQPMLFVKMQTSERNNRVRSSSGDGLIREGSLEKSYSESVSALMKEEYAEEAENASVTDDDISSQSSMAAASSTFGSTGNLSPQRENGSEAISGSSRNVNDQEVLVQDKRVAESLSSTDLYTEIINARTTLSNLRNSRFTMLPEKAESYNVKLSKLSIANDNGNSRNVAYVNLHEKVPKRAMESQMYEVDDEQSCIRLKNPNASQSGRESQIIGDLGSDVLHADRLQNTKSVSSSLDSRYSNGSDVLLDRLKNLKPVSSSLDSGFSNGSDVLLDRLKNLKPVGASLDSDFSNGSVRSGKVLDKFKKVGVSKVQDLEQRVQALEGELREAAAIEVSLYSVVAEHGSSIHKVHAPARRLSRLYLHAYKENSQSRRATSGRSIVSGLILVAKACGNDVPRLTFWLSNAVVLRAIIHKSFEKEQASLSSEKSSKTNGVIIENGTNEIISPFKWKKESSIKESRIGSNEWEDPCMLTSILEKVESWIFSLIIESIWWQTLAPYMQTTAAKGIVRRVVDSESNKTCEPSPGSYDHEKVNSSLELWKTAFMEVCERICPVRGAGHDCGCLRVLSTLIMKQCMGRLDVAMFNAILRESADEVPTDPVSDPISDPRVLPIPSGKASFGAGAQLKKTIGNWSRWLTELFGIEINDSLTDENEADYDENREVYDTSFNSFHLLTALSELMMLPKDMLLSNTIRKEVCPSFGVPLIKRILDGFVPDEFCPDPIPDVVLEALDSEDLLQSCGEGCVMGLPCAAPPIVYHPPSASLIGCDLGDDGNQARCGSSILRKSNTSDDELDELDSPLTSIIDSSRTVTASTKPIWALKDCGSRNTVRYQLLREVWMNNE | 994 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain8g02064 | 994 | Coils | Coil | 466 | 486 | - | - | |
| Sain8g02064 | 994 | ProSiteProfiles | C2 NT-type domain profile. | 7 | 167 | IPR019448 | - | |
| Sain8g02064 | 994 | MobiDBLite | consensus disorder prediction | 205 | 253 | - | - | |
| Sain8g02064 | 994 | PANTHER | NUCLEAR PORE COMPLEX PROTEIN NUP205 | 3 | 992 | IPR021827 | GO:0005643(InterPro) | |
| Sain8g02064 | 994 | MobiDBLite | consensus disorder prediction | 212 | 253 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain8g02064 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 140600 | Sain5g01902 | Sain8g02064 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr8:137091991 | Sain9g02169 | Sain-Chr9:133280476 | dispersed | |
| Sain | Sain-Chr10:157268317 | Sain8g02064 | Sain-Chr8:137091991 | wgd | |
| Sain | Sain-Chr5:95071574 | Sain8g02064 | Sain-Chr8:137091991 | wgd |