Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso11g01329 | ATGGTGATGAAGCCTGCATGGTTGGAAGGATTAATGGGAGAGAGCTTCTTTGGGATATGTAGGTTTCATGAGAATAAAAGAAAGAATGAAAAAAACATATTTTGCTTAGACTGCTGTCAAAGCTTCTGCCCTCACTGTCTTCCTGCTCATCACACTCATCCACTTCTTCAGGTGAGAAGATATGTTTACCAGGATGTTGTTAGATTAGATGACCTCGAAAAGCTCATTGACTGTTCTTTTGTACAGCCTTACACAATAAACAGTGCAAAAGTGATATTCTTGAACCAGAGGGCACAAAGTAGGTCTTGCAAGGGCCCTGCAAATTCATGCTTCACATGTGATAGAATTCTACAAGAGCCATTCCACTTCTGTTCTCTTTCTTGCAAGGTTGATCACATGGTGTATCAAGGAGAGGATCTATCTGGCATCTTGTGTAGGTTTGATGTGACCGATTTTGCCTTCTCACAATTTGAAGGACTTCGGATGGATGGTTGTGAGTTTGGAGACGATGACGGTCAGATCACCCCGAACTCCATTCTTGAAGACTTTAAAGATTCATCGGGGTCTGATAATGGCGTCAGTATTTCATACAAACCAGAAGTCGAGAGGAGGAAGAAGAAGAAAAACAATGACTTCATTCCTAAATTTTTTTCCTTTGGTAACAGAAGAAAAGGAGCTCCACAACGGTCACCACTGTCTTAA | 702 | 41.31 | MVMKPAWLEGLMGESFFGICRFHENKRKNEKNIFCLDCCQSFCPHCLPAHHTHPLLQVRRYVYQDVVRLDDLEKLIDCSFVQPYTINSAKVIFLNQRAQSRSCKGPANSCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLSGILCRFDVTDFAFSQFEGLRMDGCEFGDDDGQITPNSILEDFKDSSGSDNGVSISYKPEVERRKKKKNNDFIPKFFSFGNRRKGAPQRSPLS | 233 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso11g01329 | 233 | MobiDBLite | consensus disorder prediction | 197 | 212 | - | - | |
| Smso11g01329 | 233 | MobiDBLite | consensus disorder prediction | 184 | 233 | - | - | |
| Smso11g01329 | 233 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 3 | 232 | - | - | |
| Smso11g01329 | 233 | Pfam | PLATZ transcription factor | 59 | 130 | IPR006734 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso11g01329 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr11:72390775 | Smso12g03725 | Smso-Chr12:90580378 | dispersed | |
| Smso | Smso-Chr11:72390775 | Smso12g01732 | Smso-Chr12:21084821 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Smso | PLATZ | 1.5e-26 | No_clan | TF | PLATZ |