AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso13g00233 | ATGGCGGCTTCTGCTGAACGCGAAAACTTCATCTATGTCGCCAAGCTCGCCGAGCAAGCTGAACGCTATGACGAGATGGTCGATGCCATGAAGAAAGTAGCAAAGTTGGATATTGAATTGACTGTTGAGGAGAGGAATTTGCTCTCAGTTGGATACAAGAATGTGGTGGGTTCGCGTAGGGCATCATGGAGGATATTATCTTCCATTGAGCAAAAAGAGGAGTCAAGAGGCAATGAAGTTAACGTCAAGCGGATTAAGGAATATAGGCAGAAGGTGGAGACAGAGCTGTCAGACATTTGCAAAGATATCATGGCTGTGATTGATGAGCATCTGATTCCGTCTTCCTCTGCTGGAGAATCTACTGTTTTCTACTACAAAATGAAAGGAGACTATTATAGGTATCTTGCAGAGTTTAAGTCTGGTAATGACAAAAAAGAAGCTGCTGATCAGTCACTGAAGGCTTATCAATTGGCTTCTACTGCTGCAGAGGAATTATCTCCTACTCATCCCATTAGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAGATCATGAACTCTCCCGAAAGAGCCTGCCACCTGGCGAAACAAGCTTTCGATGAAGCTATCTCAGAGCTTGATTCCTTGAGTGAGGAATCATACAAAGATAGCACTCTAATTATGCAGCTCTTGAGGGACAACCTCACCTTGTGGACTTCCGACATCCCGGAGGATGGAGAAGATCAAAAGATGGAGATCACCAAGTCCGGTGAAGATGCAGAGTAA | 771 | 44.1 | MAASAERENFIYVAKLAEQAERYDEMVDAMKKVAKLDIELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEVNVKRIKEYRQKVETELSDICKDIMAVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGNDKKEAADQSLKAYQLASTAAEELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGEDAE | 256 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso13g00233 | 256 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Smso13g00233 | 256 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Smso13g00233 | 256 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Smso13g00233 | 256 | Coils | Coil | 194 | 214 | - | - | |
| Smso13g00233 | 256 | MobiDBLite | consensus disorder prediction | 237 | 256 | - | - | |
| Smso13g00233 | 256 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Smso13g00233 | 256 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Smso13g00233 | 256 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Smso13g00233 | 256 | MobiDBLite | consensus disorder prediction | 238 | 256 | - | - | |
| Smso13g00233 | 256 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Smso13g00233 | 256 | Coils | Coil | 13 | 33 | - | - | |
| Smso13g00233 | 256 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Smso13g00233 | 256 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
| Smso13g00233 | 256 | SMART | 1433-4 | 7 | 247 | IPR023410 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso13g00233 | K06630 | 14-3-3 protein epsilon |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr13:17570935 | Smso18g01618 | Smso-Chr18:74265519 | dispersed | |
| Smso | Smso-Chr13:17570935 | Smso26g01777 | Smso-Chr26:31008645 | wgd | |
| Smso | Smso-Chr13:17570935 | Smso7g00026 | Smso-Chr7:334092 | wgd | |
| Smso | Smso-Chr13:17570935 | Smso9g00651 | Smso-Chr9:15143333 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| SmsoJAKNSE010000048g00004 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 85.328 | 7.05e-162 | 449.0 | |
| Smso29g00933 | . | 189 | 220 | 14-3-3 family | AT1G26480 | 62.5 | 4.88e-08 | 47.0 | |
| Smso27g00076 | . | 7 | 266 | 14-3-3 family | AT1G35160 | 73.946 | 4.95e-132 | 370.0 | |
| Smso26g00549 | . | 3 | 263 | 14-3-3 family | AT2G42590 | 75.573 | 9.58e-147 | 409.0 | |
| Smso26g01777 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.55e-150 | 419.0 | |
| Smso26g02843 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 85.714 | 2.77e-160 | 444.0 | |
| Smso25g00733 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 9.69e-151 | 419.0 | |
| Smso25g01186 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 6.38e-162 | 451.0 | |
| Smso24g01983 | . | 24 | 112 | 14-3-3 family | AT1G78300 | 80.0 | 1.00e-44 | 142.0 | |
| Smso24g02526 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 75.676 | 3.20e-144 | 403.0 | |
| Smso23g01617 | . | 7 | 265 | 14-3-3 family | AT1G35160 | 84.615 | 8.48e-163 | 450.0 | |
| Smso22g00199 | . | 29 | 179 | 14-3-3 family | AT4G09000 | 71.895 | 4.87e-72 | 217.0 | |
| Smso22g00204 | . | 29 | 179 | 14-3-3 family | AT4G09000 | 71.895 | 4.87e-72 | 217.0 | |
| Smso22g00860 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 85.425 | 1.03e-159 | 443.0 | |
| Smso22g00935 | . | 6 | 255 | 14-3-3 family | AT1G35160 | 66.798 | 1.85e-117 | 335.0 | |
| Smso22g01713 | . | 23 | 251 | 14-3-3 family | AT5G38480 | 86.463 | 6.45e-150 | 416.0 | |
| Smso21g00501 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 86.508 | 8.15e-162 | 448.0 | |
| Smso21g02635 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 87.16 | 2.60e-167 | 461.0 | |
| Smso18g01618 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.42e-150 | 419.0 | |
| Smso17g00909 | . | 4 | 244 | 14-3-3 family | AT5G10450 | 84.647 | 3.65e-153 | 426.0 | |
| Smso17g00940 | . | 29 | 206 | 14-3-3 family | AT1G35160 | 82.584 | 6.85e-108 | 309.0 | |
| Smso17g01119 | . | 23 | 63 | 14-3-3 family | AT1G22300 | 68.293 | 9.56e-15 | 65.1 | |
| Smso15g00069 | . | 16 | 47 | 14-3-3 family | AT1G34760 | 87.5 | 4.00e-12 | 60.1 | |
| Smso15g00077 | . | 9 | 52 | 14-3-3 family | AT1G26480 | 72.727 | 5.45e-13 | 62.4 | |
| Smso15g00133 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 5.82e-163 | 452.0 | |
| Smso15g00799 | . | 197 | 258 | 14-3-3 family | AT1G78300 | 66.667 | 1.67e-18 | 77.0 | |
| Smso15g00986 | . | 2 | 57 | 14-3-3 family | AT5G38480 | 87.5 | 2.41e-26 | 99.4 | |
| Smso15g01631 | . | 4 | 254 | 14-3-3 family | AT3G02520 | 89.641 | 3.85e-158 | 460.0 | |
| Smso14g00233 | . | 189 | 220 | 14-3-3 family | AT1G26480 | 62.5 | 2.04e-08 | 47.0 | |
| Smso14g01109 | . | 6 | 263 | 14-3-3 family | AT1G35160 | 67.054 | 2.06e-121 | 345.0 | |
| Smso14g02031 | . | 2 | 252 | 14-3-3 family | AT5G38480 | 88.048 | 7.87e-166 | 461.0 | |
| Smso13g00233 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.55e-150 | 419.0 | |
| Smso13g00423 | . | 2 | 72 | 14-3-3 family | AT3G02520 | 79.167 | 2.77e-32 | 112.0 | |
| Smso13g01090 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 76.834 | 1.14e-146 | 409.0 | |
| Smso13g01092 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 76.834 | 1.14e-146 | 409.0 | |
| Smso12g01249 | . | 11 | 257 | 14-3-3 family | AT3G02520 | 90.283 | 5.74e-163 | 449.0 | |
| Smso12g01547 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 86.719 | 2.32e-163 | 451.0 | |
| Smso12g02237 | . | 3 | 169 | 14-3-3 family | AT3G02520 | 80.838 | 5.26e-98 | 282.0 | |
| Smso12g03137 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 84.064 | 5.21e-160 | 443.0 | |
| Smso11g01493 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 86.719 | 2.32e-163 | 451.0 | |
| Smso11g01790 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 87.843 | 1.14e-165 | 457.0 | |
| Smso11g02456 | . | 28 | 101 | 14-3-3 family | AT3G02520 | 76.923 | 1.50e-34 | 117.0 | |
| Smso9g00651 | . | 1 | 244 | 14-3-3 family | AT2G42590 | 80.738 | 4.25e-149 | 415.0 | |
| Smso8g00302 | . | 29 | 138 | 14-3-3 family | AT4G09000 | 77.477 | 1.51e-52 | 164.0 | |
| Smso8g00981 | . | 4 | 244 | 14-3-3 family | AT5G10450 | 86.307 | 2.38e-148 | 440.0 | |
| Smso7g00026 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 75.285 | 5.13e-147 | 410.0 | |
| Smso6g00413 | . | 6 | 263 | 14-3-3 family | AT2G42590 | 76.834 | 9.39e-147 | 409.0 | |
| Smso5g01652 | . | 2 | 159 | 14-3-3 family | AT3G02520 | 71.698 | 7.65e-73 | 218.0 | |
| Smso5g02214 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 86.111 | 1.27e-160 | 446.0 | |
| Smso4g02998 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 87.16 | 3.88e-167 | 461.0 | |
| Smso3g00066 | . | 1 | 266 | 14-3-3 family | AT1G35160 | 83.146 | 1.32e-162 | 449.0 | |
| Smso2g01686 | . | 2 | 72 | 14-3-3 family | AT3G02520 | 86.111 | 2.19e-37 | 123.0 | |
| Smso2g02898 | . | 2 | 258 | 14-3-3 family | AT1G78300 | 85.271 | 1.34e-162 | 449.0 | |
| Smso1g02249 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 2.09e-151 | 421.0 | |
| Smso1g02788 | . | 75 | 185 | 14-3-3 family | AT1G35160 | 40.708 | 1.28e-18 | 78.2 | |
| Smso1g03592 | . | 6 | 126 | 14-3-3 family | AT4G09000 | 77.049 | 6.22e-58 | 184.0 |