AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso13g00239 ATGGACACAGAGAACCAAGAAGCAAAGCTCGATGCCACACTTATTGCTCCTGAAAAGCGAAAACGTGGCCGCCCACGAAAGGACCCGAGTGAAAGACGGGCCCAAAAAGCTCGTTCGCAAGCTGCTCGTATGCCTCCTGGTTTTGTACAGTTGATCAACAACACTCCTCGAGTTGACCCGATCAATGATCCAACTGAAACTATGGTTGGACAGGTTGTAACTGGTGTTGTTGAGGCAACTTTTGATGCAGGTTACCTGCTCGCGGTTAGGATCCGGAATTCAAAAATCACACTAAGGGGTGCTGTTTTCAAACCAGGCCACACTGCACCTGTGACACCCGAAAATGATGTGGCACCTCATGTTGAAATGATCAAAAGAACTGAAATTCCATTCCCAGCAGAACTCCAACCCAAACGTAGGCGTAAACGAAGATCAAAAGAAAAAAATATGCAACTTGTTACCTATGTCGGGAACGGGTCAAACCCAGTGGTTACAAATGCACCTACTAAAACCAACTATGGGCTAGCCCCATCGGTCTCACCGGTTGGTACGAGAGGGACCATGGTCCCTGTTGTTCTTCAACCAGTAAACCTATCAAACGGTTTATCCACCAACCAACCTGCACCTCATTTGCGGGCTTCACAAGGCAAGCCTGTGCACTCGGTTCTGCCATTGGCGGTATACCCACCAAATGGGTCAACAAGTCAACCGTCAGACTCTCAAACTAGCTCCCAGTTTACGGTTACGCCCTCAGTTTCTGGAAACGATAACACTCCTTTTAAACACGCTGAAGGGGGTAAATCGCTAAAATCAAATGATATGCAAGATCCAGTTGTGAAAACAGAATCAGATGTTGGTGATATGAATGAGCCTCTTTTTGTTGAACCACTGCAAACTCGACACTTGGTTCATCATTTCCAACCTCCGTCAGTGTTGGGAGGTGTGATGCATGTTGGGACCGGGAGAATGACTGAGCTTTTACAGGCTGTTCAACAAAATATGGGCGATGACCAGGTTCCTAGAAACGGCGAACATCCAGCTGCAATTGCTCAGGCAGGAAAAATGTAA 1068 47.19 MDTENQEAKLDATLIAPEKRKRGRPRKDPSERRAQKARSQAARMPPGFVQLINNTPRVDPINDPTETMVGQVVTGVVEATFDAGYLLAVRIRNSKITLRGAVFKPGHTAPVTPENDVAPHVEMIKRTEIPFPAELQPKRRRKRRSKEKNMQLVTYVGNGSNPVVTNAPTKTNYGLAPSVSPVGTRGTMVPVVLQPVNLSNGLSTNQPAPHLRASQGKPVHSVLPLAVYPPNGSTSQPSDSQTSSQFTVTPSVSGNDNTPFKHAEGGKSLKSNDMQDPVVKTESDVGDMNEPLFVEPLQTRHLVHHFQPPSVLGGVMHVGTGRMTELLQAVQQNMGDDQVPRNGEHPAAIAQAGKM 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso13g00239 355 MobiDBLite consensus disorder prediction 336 355 - -
Smso13g00239 355 MobiDBLite consensus disorder prediction 1 44 - -
Smso13g00239 355 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 346 IPR045881 -
Smso13g00239 355 MobiDBLite consensus disorder prediction 228 258 - -
Smso13g00239 355 MobiDBLite consensus disorder prediction 1 38 - -
Smso13g00239 355 MobiDBLite consensus disorder prediction 223 275 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso13g00239 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
424951 Smso13g00239 Smso29g00024
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4951348 Smso Smso13g00239 Smso-Chr13:19438149 Smso7g00462 Smso-Chr7:7786794
5050333 Smso Smso13g00239 Smso-Chr13:19438149 Smso26g01733 Smso-Chr26:29625287