AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso13g00351 | ATGGCTCGACGTGTCGAATACAAGCATAATCAAGTGGCATTATTAGATCCTAATATGCCGGAAGCTGTTCATTTTCAAGGCATAATCAATTTTCTGAATCGATCAAGATTGCGTGTTGCTTTATCTGCGGATCCGTATATTAGCTTGGTGTATACACAACAATTCTGGGATACCGTACATCAAGATATCGACGTGGAACCACATGTCCTTCGTGCAACAGTCAATAATACCGCTATTGCAATTTCCGAAGCGACAATTCGAGCTGCTCTTGATTTAGGAGGAAATGCTGAAGATCCAATTTCTTATCCTAGTACTCTTATTATGGGATGTTTTCAAAGGATGGGTTATCGTGGACGACAAAATGACACTCAAGCTCGGAAAGGTTGTTTAGTGGGTGAATGGCGATACTTTATGCATGTGATCATACAATGCATTTCTCCACGAAAAGCTGGTACGGATGGCTTGAAGATGGCATTACAAACGGCAATGGTGGCCTTAACATTGAATAAGCGATTCAATTTTCCGCTTTATTTCTATAGGGAGATAGTTATGCAGATCAATCCAGCTGAAGGTCAAGGTTTCTTGATGTATCCAAGGTTTATTCAGCTGATACTTAATCATCTTATTCCAGATCTTCCACAACATGCTATTAGATTGACTTTGACTCCGATGTCAAAACGTATCTTTACAGATTGTACTAAGGTGAAACAGCAGAATGCTGCTTTGATTCCAGTGAATACTGCACTGTTTGGGCACTTAATCAATCCTGATTATGTTGCACCACTGAATAACGACTGGTTTCATCCAGATGAACTTGCTCAAGTTCAAGGAGTTAATGTTCAACCACAACCACAACAGCAACAACCACAACAGCAACAACCACAACAACCACTACAACAAGTTCAACCTCAACAGATTCCACAACCACAAATTCAAATTCCTATTCCTGAACAAATTCCTATTCCACAAGCTGCATTTAATATTCCTATTCAGGAACCAATTTTAGAAGAGGTCGTTCATGATCCTGATCATGATCTAGGAATGAACATGGATGATTTTGTTGATGATGCTGTGAACTCGCCAATTCATGAACAAGAAGGGAATGTGGTGACTGAAGCTGAGTCAAGTTCCAGTTCAAGTGATACTACATCATCTGATGATGACAACACTGCTTCTGATGAATCTAGAGATTTTTCTCCAGGTCATTATGAACGGTTGGCTGCTATTCCACTGGCTAATGCTGGAAAACGCATTAAATCTCAAGCCAGACGACCACGACGCAAGTCTGTTCGGGATCCTCCTTCCGGATCAGTTCTTGGAAAAAGATCGTTGGTTGATGAACGTTCTGACACTGATAGTGACTTTAATCCTGATTCTTCACGACAAAAGTTAATGTCTGCTTCAATTGCGGCTGCACAGTCTTTTCAAGGAGTTGAGGATGCAAATTTTGTTGCTTCTCTGATTGTTACTCCTCCAAGATCTAAGGATCCATCTCCAGTTCCATCTCCTATTCATACAACAATTCCTACTACTTCAAGTCCTTCTATTCCACAATCCACAGCTGGTCCATCAAAGACTTCTGATTCTGACAGGATTACTTTCCTTGAATCTCAAGTGCTTACTTTACAAACACAAGTTAACTCTCTTGTGTCTATTGATTCTCAACGACAGCTGGGGGAGTTGAGGATACCTGATACTTGTCACACTGAGTCAATACAAAGACGTGATGATGAAGACAATGATCCTGCTGGAAATATTGAGGGTGATCGTCAATACACTGACGCTAATCCTATATCTAGAGTTCAAGGGGAGTCGACATCACAATCTCTTGAAGGAAACAAAGATAAAGATACTTCGGGTAATAATGAAGAAGAAATTCTGTTATTAGAATTCTTTCAAGATTCAGAAGAAGAGGCTGAAAAGATTGAATGTCTTGATGACATTGACGATTTATTCAATGACATGGAAGATGATATGTCAGACACTGAGATAGAAGAAGGAGAAATAGTGGAGATTGAAATAGAGAAAGATAAAGACAGTGTTACATATGAAGGCTGTGACGGTCTTAAGATGCCGTATAACTTCATCCAAGAGGATGTTGTTCCTGAATTCTCTTATGACGGAATAACTGACTCTATGGACTCTATTGAAGACGTCACATTGCCTGATGATACAGCTGAGTCAAAGATGGATACGGATGATGAGAATCTTCAATTCAATAAGAATGCTGAAACTGAAACTACTCACACTGAGTCTCCGAAGATTAATGAAGAACCTGTGATGTTTAGAGATACATGTATGACACGAGAACAGTGGAGAGAAGTAGTAAATAGTTGGATGAAGGTACAACCCAAGTCTCCAATACAAACTGCTCAGAAAGAAAAATATGTGAATAAAGAGCAGTGTGTAGGAAGGATCATAAGTTGGTTCTATGATGATGAATCAAAATTGTTTGTAATCAAACGATCTGACGGTGTTCAATACTTAAAGCCTAGGATCAAATATTTCAATACCTTACCGAGGTGTGAAATAAATGGTCTAGCTTCAAAGCCTCTCATAAATAGATCGAAGAATGGTTTGGCTGATGTGATAGCAAATCTGATAAAGAAAGAAGGTAGTTCGGGTAAGTATGAAAGGCTGAAACCACAGAAGGGAAAGAGAGTGAAGAACACAGATCCTAAGACTGGAAAAGTAACCTGGATATACAAGTATAGACCAGTACGTGCTGTACACAAGATACCATTGAAGAAGATTCCTCAAGACTTTCTTGGGAATATGAAATGGTGGTATGTTGATGTTAATACTGGTGAAGCAAGGGTTGAGGATAAAGATAATAAGGTCATTGTGTGTTTCTATGACGCAATGAATCTTATTAATTTTTCAAAGAAAGATCAGAGGACACTGAGAAAGAATGAGATAATGTATACTGATGAATGGAGAGAACAAGGTCTACAGTATAAAAGAGTTTTGGAGATATGCAGAAGATATGGTGTGCATGCTGGCAGCAGACTACCGGATAACTGGAAGACTTCAAGATAA | 3039 | 39.12 | MARRVEYKHNQVALLDPNMPEAVHFQGIINFLNRSRLRVALSADPYISLVYTQQFWDTVHQDIDVEPHVLRATVNNTAIAISEATIRAALDLGGNAEDPISYPSTLIMGCFQRMGYRGRQNDTQARKGCLVGEWRYFMHVIIQCISPRKAGTDGLKMALQTAMVALTLNKRFNFPLYFYREIVMQINPAEGQGFLMYPRFIQLILNHLIPDLPQHAIRLTLTPMSKRIFTDCTKVKQQNAALIPVNTALFGHLINPDYVAPLNNDWFHPDELAQVQGVNVQPQPQQQQPQQQQPQQPLQQVQPQQIPQPQIQIPIPEQIPIPQAAFNIPIQEPILEEVVHDPDHDLGMNMDDFVDDAVNSPIHEQEGNVVTEAESSSSSSDTTSSDDDNTASDESRDFSPGHYERLAAIPLANAGKRIKSQARRPRRKSVRDPPSGSVLGKRSLVDERSDTDSDFNPDSSRQKLMSASIAAAQSFQGVEDANFVASLIVTPPRSKDPSPVPSPIHTTIPTTSSPSIPQSTAGPSKTSDSDRITFLESQVLTLQTQVNSLVSIDSQRQLGELRIPDTCHTESIQRRDDEDNDPAGNIEGDRQYTDANPISRVQGESTSQSLEGNKDKDTSGNNEEEILLLEFFQDSEEEAEKIECLDDIDDLFNDMEDDMSDTEIEEGEIVEIEIEKDKDSVTYEGCDGLKMPYNFIQEDVVPEFSYDGITDSMDSIEDVTLPDDTAESKMDTDDENLQFNKNAETETTHTESPKINEEPVMFRDTCMTREQWREVVNSWMKVQPKSPIQTAQKEKYVNKEQCVGRIISWFYDDESKLFVIKRSDGVQYLKPRIKYFNTLPRCEINGLASKPLINRSKNGLADVIANLIKKEGSSGKYERLKPQKGKRVKNTDPKTGKVTWIYKYRPVRAVHKIPLKKIPQDFLGNMKWWYVDVNTGEARVEDKDNKVIVCFYDAMNLINFSKKDQRTLRKNEIMYTDEWREQGLQYKRVLEICRRYGVHAGSRLPDNWKTSR | 1012 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 364 | 461 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 567 | 585 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 364 | 386 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 279 | 307 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 563 | 622 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 491 | 530 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 443 | 457 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 505 | 530 | - | - | |
| Smso13g00351 | 1012 | MobiDBLite | consensus disorder prediction | 595 | 615 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso13g00351 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr13:45174236 | Smso7g01355 | Smso-Chr7:60916457 | dispersed | |
| Smso | Smso-Chr1:75520068 | Smso13g00351 | Smso-Chr13:45174236 | wgd | |
| Smso | Smso-Chr10:65039323 | Smso13g00351 | Smso-Chr13:45174236 | wgd | |
| Smso | Smso-Chr10:65851697 | Smso13g00351 | Smso-Chr13:45174236 | wgd | |
| Smso | Smso-Chr12:41774577 | Smso13g00351 | Smso-Chr13:45174236 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso14g00847 | Smso-Chr14:28874999 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso15g00420 | Smso-Chr15:30346678 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso15g00556 | Smso-Chr15:38974022 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso16g00783 | Smso-Chr16:44484675 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso18g00700 | Smso-Chr18:44950037 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso19g01065 | Smso-Chr19:42306827 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso2g02173 | Smso-Chr2:70555562 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso2g02377 | Smso-Chr2:92536925 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso2g02307 | Smso-Chr2:84402586 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso20g01532 | Smso-Chr20:45657875 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso20g01510 | Smso-Chr20:42078424 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso21g02534 | Smso-Chr21:48325354 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso21g02528 | Smso-Chr21:47525031 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso22g00474 | Smso-Chr22:25823718 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso25g00895 | Smso-Chr25:20134086 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso27g01063 | Smso-Chr27:25845770 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso3g01272 | Smso-Chr3:56815120 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso5g01079 | Smso-Chr5:36392609 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso6g02117 | Smso-Chr6:63993437 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso6g02172 | Smso-Chr6:69790648 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso6g02350 | Smso-Chr6:96479249 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso7g01317 | Smso-Chr7:54601041 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso7g01162 | Smso-Chr7:38367341 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso9g01140 | Smso-Chr9:54054453 | wgd | |
| Smso | Smso-Chr13:45174236 | Smso9g01166 | Smso-Chr9:63508546 | wgd |