Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03337	ATGGATCAACAGCATATACTCTATGAAGAAGATGTAGTAAACGGCGGCAACACAGCTTTGACTTTGTCCACCGACGGGAAGCTGCGGTGGTATGATCACGGCAACGTCCTTCGTTGCCTGTCCCTCGACGGAGAAGTTCTCGGAGTATCAATCGCCGGACAGCAAATCATAATTAGGTCATTTGTTGAGATAGATGGATCTTGCATTGGAAGTTGCGGAGAGAGTTTGGTAAGGAAGAGCTTCGTCTTCGAGGCATCGTCGGAGGATTCACTACACAATTTGTGCCACAAGATTCAGGGATACATTGACTCCCTAGGCAGGCCAAAGAAACTGTTTATATTTGTTAACCCATTTGGAGGGAGGAAATCGGCTTCCAAGGTTTTTACCAATGATGTAAAACCTATACTCGAGGATGCTAATATAGAATATACTTTACAAGAAACTAAATATCAGCTTCATGCAAAGGAAGTTTCTCATAATTTGGATCTTACAAAGTATGACGGCATTCTTTGTGTTAGCGGAGATGGGATATTGGTTGAGGTTGTTAATGGATTGCTTGAAAGAGACGACTGGCAAGCAGCACTCAAGATGGCTATTGGAGTTATACCTGCAGGTACTGGAAATGGAATGATAAAATCTCTTCTAGATTCAGTTGGTCAACCATGTACAGCTGCTTATGCTATGCGTGCTGTAATTCAAGGGCATAAACGCTCTCTGGATGTAGCCACAATCTGGCAAGGGGAGGCTAGGTCTTTTAGTGTCTTGATGCTTGCATGGGGACTGATAGCTGATATAGATATCGAGTCTGAGCAGTATCGGTGGATGGGAAGTGCTCGAATGGATTTATATGGTCTACAACGAATTCTAAGACTGCGGAAATATAACGGCTGTATTTCTTTTGTACCTGCTCCTGGTTTTGAAGATGTAGGAGAACCAACCAGTGTTGCTCTTGAACCTCTTAAAAGTCAGCACCATGGTTACCAGGGCCCTAAGCTTAATTTGGAGAGTTTAAGTTGGAGAAGGCTTAATGGTCCCTTTATTGGTATTTGGCTGCAGAATGTTTCTTGGGCATCTGAAAAAGCCATGGCTGCACCCAATGCTAAGTTTGATGATGGTTATTTAGACTTGATTTTAATGTGGAATTGCCCGAAGTTAAGCTTGATGTCCTTGATGTCTGAAATGAGTAATGGGCATTATGTAAGATCCCCACATGTTCTGTATACTAAGGTGAAGGCGGTGATCTTGGAGCCGGGTTCCCGGACAGGTGACTCGACTAAGGAAGGGATTATAGATTCTGATGGGGAAGTCTTGGCAAGAGGCAAAGGAACGTATAAGTGCGGATTAAACTCCTTGATGCGCTATGATAAGCTGCAAATGGTGGTGGATCAAGGGTTGGCTACTTTCTTTACCCCTATTTGA	1419	43.55	MDQQHILYEEDVVNGGNTALTLSTDGKLRWYDHGNVLRCLSLDGEVLGVSIAGQQIIIRSFVEIDGSCIGSCGESLVRKSFVFEASSEDSLHNLCHKIQGYIDSLGRPKKLFIFVNPFGGRKSASKVFTNDVKPILEDANIEYTLQETKYQLHAKEVSHNLDLTKYDGILCVSGDGILVEVVNGLLERDDWQAALKMAIGVIPAGTGNGMIKSLLDSVGQPCTAAYAMRAVIQGHKRSLDVATIWQGEARSFSVLMLAWGLIADIDIESEQYRWMGSARMDLYGLQRILRLRKYNGCISFVPAPGFEDVGEPTSVALEPLKSQHHGYQGPKLNLESLSWRRLNGPFIGIWLQNVSWASEKAMAAPNAKFDDGYLDLILMWNCPKLSLMSLMSEMSNGHYVRSPHVLYTKVKAVILEPGSRTGDSTKEGIIDSDGEVLARGKGTYKCGLNSLMRYDKLQMVVDQGLATFFTPI	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03337	472	ProSiteProfiles	DAG-kinase catalytic (DAGKc) domain profile.	106	248	IPR001206	GO:0016301(InterPro)
	Smso1g03337	472	SUPERFAMILY	NAD kinase-diacylglycerol kinase-like	107	444	IPR016064	-
	Smso1g03337	472	PANTHER	SPHINGOSINE KINASE	74	440	IPR050187	GO:0001727(PANTHER)\|GO:0005737(PANTHER)\|GO:0006665(PANTHER)\|GO:0016020(PANTHER)\|GO:0016310(PANTHER)\|GO:0043231(PANTHER)\|GO:0046512(PANTHER)
	Smso1g03337	472	Gene3D	-	92	236	IPR017438	-
	Smso1g03337	472	Pfam	YegS C-terminal NAD kinase beta sandwich-like domain	354	439	IPR045540	-
	Smso1g03337	472	Pfam	Diacylglycerol kinase catalytic domain	110	243	IPR001206	GO:0016301(InterPro)
	Smso1g03337	472	SMART	dagk-c4a-7	110	259	IPR001206	GO:0016301(InterPro)
	Smso1g03337	472	FunFam	Sphingosine kinase 2	95	239	-	-
	Smso1g03337	472	Gene3D	-	241	451	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03337	K04718	sphingosine kinase [EC:2.7.1.91]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337918	Smso28g00641	Smso1g03337
	357569	Smso1g03337	Smso28g00641
	428944	Smso1g03337	Smso28g00641

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr12:73412663	Smso1g03337	Smso-Chr1:115112060	dispersed
	Smso	Smso-Chr12:73414591	Smso1g03337	Smso-Chr1:115112060	dispersed
	Smso	Smso-Chr19:84207464	Smso1g03337	Smso-Chr1:115112060	dispersed
	Smso	Smso-Chr1:115112060	Smso29g01838	Smso-Chr29:46632419	dispersed
	Smso	Smso-Chr1:115112060	Smso28g00641	Smso-Chr28:25748542	wgd