Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03338 | ATGCCTCATTTGTTATCATCAAATGGTATACGGATTCTTACTCAAAAAGTTCTGTTCTTCACCGTCGGCGTCGCATCGGTGGTTATCGCGGTGGAATTCGTCGTTCCGTTGCTGTTAGACGTCCAGTCCTGTCTCAAACCACCGTATCTCTACCTCCTCATCAACATTATCATTCTCACAATCACTGCCACCTCACATTTCCACCAACACGATGATCAATCTCATCAGAGTTTTGGTATTTTGGACGGTGTACCTTGGTCTTTTGAGCAGCCTCAACCACCGATTGAAGGGGTGGAGGATTTTGATGTACGGAGGTCTGCCACTATCTGGAATCCGCCGGTTCCTCCGCCGCTAGTTACTTCCCCATTCGCTCAACAGAAACCGACAGAAAACATTCCTGATGGTGGGGAGGAAAATAATTTTATCGACGGCCATGACATGCCGGTCACGAAACACCTCCAGAAATCGGTGACCTTCGATAACCATCGTTACTCGTACGGCCGTCTTCAGGCAGCGGAAACGGCGGTGGTGAGTAAGAAAAAGAACGCGGTGAAGAAATCCGCGACGCTCAAAGACCGTACGAACTACGACAACAAAAACCACCGTCTTCCGTCTTCACCGGCGTCGGGTGGAAAACTGAGGACGGTCGGGTCACCGAGTCACGACGAGTTGAACCGGCGAATCGAAGAGTTTATAAAAAAGTTTAATGATGAGATGAGGTTGCAGAGACGAGAGTCAGTGAAGAAGCAGTACAGGGTCGGGAGAAAAAATAATTAA | 777 | 48.65 | MPHLLSSNGIRILTQKVLFFTVGVASVVIAVEFVVPLLLDVQSCLKPPYLYLLINIIILTITATSHFHQHDDQSHQSFGILDGVPWSFEQPQPPIEGVEDFDVRRSATIWNPPVPPPLVTSPFAQQKPTENIPDGGEENNFIDGHDMPVTKHLQKSVTFDNHRYSYGRLQAAETAVVSKKKNAVKKSATLKDRTNYDNKNHRLPSSPASGGKLRTVGSPSHDELNRRIEEFIKKFNDEMRLQRRESVKKQYRVGRKNN | 258 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03338 | 258 | MobiDBLite | consensus disorder prediction | 184 | 220 | - | - | |
| Smso1g03338 | 258 | MobiDBLite | consensus disorder prediction | 185 | 199 | - | - | |
| Smso1g03338 | 258 | Pfam | Cotton fibre expressed protein | 221 | 249 | IPR008480 | - | |
| Smso1g03338 | 258 | Pfam | Domain of unknown function (DUF4408) | 42 | 67 | IPR025520 | - | |
| Smso1g03338 | 258 | PANTHER | COTTON FIBER (DUF761) | 34 | 250 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03338 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:115125137 | Smso21g01875 | Smso-Chr21:23418570 | dispersed | |
| Smso | Smso-Chr1:115125137 | Smso4g01916 | Smso-Chr4:29152994 | transposed |