Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03339 | ATGCTTGCTCTGCACTTTTCATCTCAGCTTGCTTCACAGCATCTTTATTACTGGAAAAACCCAAAGGAACAAAGAGCCATTATGATAATTATTCTTATGGCCCCTATTTATGCTGTTAGTTCTTTTGTGGGTGTGCTGGATCTCGAGGGAGGCAAACTGTTTCTCATGCTGATCGGTTTGATTAAGGAATGTTACGAGGCTTTGGTTGTTGCTAAGTTTCTTGCTTTACTGTATGGGTATGCGAATATGGATGTTAGCAATAATATAATTCCTGATGAAGTCAAGGGAAGAGAAATCCGTCATGCGTTCCCAGTGACTCTTTTCCAACCTCGTTCCGATAAACTGAATCACCAAACGTTGAAGCTTCTGAAATACTGGACTTGGCAGTTTGTTGTTACACGACCCGCATGTTCATTTCTAACGTTCGGTTTACGGTTGCTTGGATTGTATCCTGATTGGGTCAGCTGGACATTCACCGTTATTCTTAACATTTCCTTTTACATGGCTATGTATTCTTTACTAGTCTTTTACCATGTTTTTGCAAAGGAATTGAAGCCTCACAAGCCACTAGCCAAGTTCTCATGCATAATTGGGATAATCTTCTTCTGCTTTTGGCAGGGAGTATTTATCGACGTCCTAGAGAAATCAGGTGTCATAAAATCACATCATTTCTGGATGGATGTTGAGCATGTTGGGGACGCGATTAAAAACTTCCTGATATGTGTTGAGATGATTGGATTTTCGGTTTTCCAACAATACGCGTTTCACTTTGAACGGTATAGTGGAGATGTCCAAACGATGCTGCAAAAGGGGAAAAGGAACGAGTGA | 828 | 40.82 | MLALHFSSQLASQHLYYWKNPKEQRAIMIIILMAPIYAVSSFVGVLDLEGGKLFLMLIGLIKECYEALVVAKFLALLYGYANMDVSNNIIPDEVKGREIRHAFPVTLFQPRSDKLNHQTLKLLKYWTWQFVVTRPACSFLTFGLRLLGLYPDWVSWTFTVILNISFYMAMYSLLVFYHVFAKELKPHKPLAKFSCIIGIIFFCFWQGVFIDVLEKSGVIKSHHFWMDVEHVGDAIKNFLICVEMIGFSVFQQYAFHFERYSGDVQTMLQKGKRNE | 275 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03339 | 275 | PANTHER | ORGANIC SOLUTE TRANSPORTER-RELATED | 1 | 265 | IPR005178 | GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER) | |
| Smso1g03339 | 275 | SMART | Solute-trans-a-2 | 1 | 260 | IPR005178 | - | |
| Smso1g03339 | 275 | Pfam | Organic solute transporter Ostalpha | 2 | 260 | IPR005178 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03339 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:115157086 | Smso7g00375 | Smso-Chr7:6198477 | dispersed | |
| Smso | Smso-Chr1:115157086 | Smso29g00423 | Smso-Chr29:6310780 | transposed |