Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03405	ATGGAAAATTCTTCTCAGGTTGGGGTTTTGGTGCCGCTGAATGATAATCTAGAGGAAGACTCTTCGAATTCAATCCCTAGGGTTGAAATCAGCAAAGGAACTAACGTATTAGGTCGCGATGTTATACCTATCACTGACAAGAGACTTAGCCGCAAACATCTATCTGTCACCGTCTCTTTTGATGGCTCTACTCAAGTGGCGGTGGAAGGAACAAATCCAGTTGTCATTAGATCTCAGGATCAAAGGAAGAAGCTTTTATCTCATGAAAAGCTAACAATTAAAGATGGTGATATTATAGAATTAATCCCTGGGCACTACTTATTTAAGTACAAGGCTTTTAATGGTGCAAAAAAGAGAGATACCCCAGACACACAAAAAAGACCTTTAAGTGAAGGAGCTCAAGATGATTCACTTGCACAAAAGCGATTACGGCAAGTTTATGAAGATGAGGCCCTTGCTAGAAAATTGCAGAGTGAGATGAACAATGATATTCAAGATAAGGAAAGAAATGTTGAGGCAATCTGCAATTTCAAGCCCCCGAAAGATAAAATTCCACAAACGTTTCGACTTATGAGAGTGAAAGGCCTGCAACCATGGGCTAATACTAATTCTGTGTCAATTGGGGATGTGATTCAGGGGAATGTGCTCGTTGCTGTTCTTTCGAACTACATGGTTGACCTTGATTGGCTAATGTCAGCATGTCCAACTCTAAAGAAAATCCCTCATGTTTTGGTGGTTCATGGTGAAAGTGATGGTAGGCAGGAGCATATGAAGAAAAACAAGCCTGCAAATTGGATTTTGCACAAACCTTCATTACCCATTGCATGGGGGACCCACCATTCCAAAGCGATGTTTCTGGTGTATCCTCAAGGAGTTAGAGTTATTGTCCATACAGCAAACTTAATCTATGTTGATTGGAATAACAAAAGCCAAGGTTTGTGGATGCAAGATTTCCTGTGGAAAAATCAAGATAGTTCAGATAAAGGAAGTGGATTTGAATCTGACCTTATTGATTATCTTAGTGCACTGAAGTGGCCTGAGTTTTCTGTTCAACTCCCTGATTTAGGCAACTTCAGCTTCAATTCATCTTTCTTTAAGAGATTTGATTATAGCAAGGCAACGGTAAGGTTAATAGCTTCTGTACCCGGATATCATTCAGGTTCAGCAATTAAGAAATGGGGACACATGAAGATCCGTTCAGTTCTACAGGATTGCGTTTTTGATAAAGAATTCCAAAAGTCACCACTTATATATCAGTTTTCGTCCCTGGGTTCTTTAGATGAAAAGTGGATGGCTGAGTTTGCGTTCTCAATGTCATCGGGGGTTTCAGAGGATAAGAAGCCTCTGGGCCTGGGGGAACCTTTGATTGTATGGCCTACTGTCGAGGATATTAGATGTTCTCTCGAGGGTTATGCAGCTGGGAGCTGTGTTCCAAGCCCTCAAAAGAATGTAGAGAAAGCATTCTTGAAGAAGTATTGGGCAAAATGGAAAGCAAGCCACACTGGTCGCTGTCGTGCAATGCCTCACATAAAGACATTTACTCGTTATAAAGGTCAAAATCTTGCATGGTTCTTGCTGACTTCATCAAACCTTAGTAAAGCTGCCTGGGGAGCACTTCAGAAAAACAACACTCAGCTGATGATTCGTTCATACGAGCTTGGGGTGCTGTTTTTACCATCTGCAACCAGCAATGCTCATGCATTTTCTTGTACCGAGAATGGGAGCACATCAGAGAATAATTATTTGAAAACTCATGAAGCAAAAAGAACAAAACTTGTAACACTGGCTTCGCCACATAGTAAGAAAATGCATCTGCCAGATGTGATTACATTGCCTGTGCCATATGAACTACCTCCACCGCGTTATTCTTCAGAAGACGTTCCTTGGTCGTGGGATCGACAATATAAGAAGAGGGATGTGTTGGGTCAAATTTGGCCTTAG	1941	41.32	MENSSQVGVLVPLNDNLEEDSSNSIPRVEISKGTNVLGRDVIPITDKRLSRKHLSVTVSFDGSTQVAVEGTNPVVIRSQDQRKKLLSHEKLTIKDGDIIELIPGHYLFKYKAFNGAKKRDTPDTQKRPLSEGAQDDSLAQKRLRQVYEDEALARKLQSEMNNDIQDKERNVEAICNFKPPKDKIPQTFRLMRVKGLQPWANTNSVSIGDVIQGNVLVAVLSNYMVDLDWLMSACPTLKKIPHVLVVHGESDGRQEHMKKNKPANWILHKPSLPIAWGTHHSKAMFLVYPQGVRVIVHTANLIYVDWNNKSQGLWMQDFLWKNQDSSDKGSGFESDLIDYLSALKWPEFSVQLPDLGNFSFNSSFFKRFDYSKATVRLIASVPGYHSGSAIKKWGHMKIRSVLQDCVFDKEFQKSPLIYQFSSLGSLDEKWMAEFAFSMSSGVSEDKKPLGLGEPLIVWPTVEDIRCSLEGYAAGSCVPSPQKNVEKAFLKKYWAKWKASHTGRCRAMPHIKTFTRYKGQNLAWFLLTSSNLSKAAWGALQKNNTQLMIRSYELGVLFLPSATSNAHAFSCTENGSTSENNYLKTHEAKRTKLVTLASPHSKKMHLPDVITLPVPYELPPPRYSSEDVPWSWDRQYKKRDVLGQIWP	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03405	646	CDD	FHA-APTX-like	9	109	-	-
	Smso1g03405	646	PANTHER	TYROSYL-DNA PHOSPHODIESTERASE 1	8	646	IPR010347	GO:0003690(PANTHER)\|GO:0003697(PANTHER)\|GO:0005634(PANTHER)\|GO:0005634(InterPro)\|GO:0006281(PANTHER)\|GO:0006281(InterPro)\|GO:0008081(InterPro)\|GO:0017005(PANTHER)
	Smso1g03405	646	Gene3D	-	17	113	-	-
	Smso1g03405	646	Pfam	Tyrosyl-DNA phosphodiesterase	188	623	IPR010347	GO:0005634(InterPro)\|GO:0006281(InterPro)\|GO:0008081(InterPro)
	Smso1g03405	646	Gene3D	Endonuclease Chain A	176	363	-	-
	Smso1g03405	646	MobiDBLite	consensus disorder prediction	117	136	-	-
	Smso1g03405	646	CDD	PLDc-Tdp1-1	205	340	-	-
	Smso1g03405	646	SUPERFAMILY	Phospholipase D-nuclease	375	645	-	-
	Smso1g03405	646	Gene3D	Endonuclease Chain A	375	646	-	-
	Smso1g03405	646	FunFam	Tyrosyl-DNA phosphodiesterase 1	176	372	-	-
	Smso1g03405	646	SUPERFAMILY	Phospholipase D-nuclease	184	399	-	-
	Smso1g03405	646	SUPERFAMILY	SMAD-FHA domain	25	110	IPR008984	GO:0005515(InterPro)
	Smso1g03405	646	FunFam	Tyrosyl-DNA phosphodiesterase 1	375	646	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03405	K10862	tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr14:65403310	Smso1g03405	Smso-Chr1:116818400	dispersed