Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03529	ATGGAAGCCCTTGATTCGGATCACAATGTCGGGCCTGAGTTTCAAGAAACGGGTTCGGATCCAAAACAAAGCAATGACGGCTGCGCCAGGGCAGAGGTTGACACGTCAGCTCCGTTTGAGTCGGTGAAGGAGGCCGTGTCCCGGTTCGGTGGAGTGGGGTTCTGGAAACCCCATCATAAGCACCTTCATGCTTCTCAGGTCCTCATTCTGTATATATTTCTAGTATTGAATCTGCTTATTCTTAACAAACAATGGGATGTCACTGAAGAGGAATTTGATGCTGCTAAAGCAGAAGAGCAGGCTGTGCAGTTAGCAAACGATCTCGTGGCCAAAGAAAGGGAAACACTTGAAGTCTTGAAAGAACTCCAAACTACAAAAACGACCGTTGAAGAACTAAAAGTCAAACTACAGAAAGAATCTGCTACGGTCAAACCAACAGTCAACGACCCGGTACCAAAGGAGGGAAATGACAAAAATGCCCTTGAACCTGAACCACAGTCAGCTGGTAACAGCTTGATGTGTCCTTCAGCTCCAGGCTTCATCTTGATGGAATTGAAGCAAGCTAAACTGAACTTAACAAGAACGACGAATGATCTTGCTGACATCAGATCAACGGTGGAGATGTATAACAAGATGATCAAGAAAGAAAGATTGGAACTTGAGAAAACCCGTCAAAGATTATCTTCAAACTCTTTAAAAATTTCATCTTTTAAAGAAAATGTTGACTTTCCGAGGGAACTACATAGGTTGACTTCTGAAACCGATGAGTTCAAAAGGGTTGGAGAGGTAGCAAAATCAGAAGTTTTAACAGCATTGAATCAAATCAAACAGACAAAAAGAAATATAAAAACAGTTGAAACCCGTCTAACTGCTGCTAGAAAGTTGAAGGAAGCTGCTAGAGCGACTGAAGCGCTTGCTCGATCTGAAATAAAGTCAATATCAAAAAGTCAAACTTTATCGGAAGGCGAAGGGGTTACTCTTTCGAATGAAGAATACTCGTGCTTGAAATTGAAAGCTCTAGAGGCGGATGAAGCTTTAATTAGAAAAGTCAACGAATCGATGGTTAAAGTCAACGAATCAGAGTTGACTAAATCGGAGATCTTGAATAGGGTAGAGGAAGCAGCAGAAGAAGTGAAGAACAGTAAGATGGTTCTAGAAGAAGCTTTGAGTAAAGTAGAAACTGCTACTAGTGAGAAACTAAAGGCAGAAGAAGCTCTTAGAAATTGGCGGTCGGATCATGGTCAAAGAAGAAAGTCAACGGTTCAAAACTCGGCCAAGTTCAAGAATTGTTCAAGCAGGGCCAACACTCGTTTGTTGGACGTAAATGGGCCCCATTTGTTGGATGTAAACGGGGCCCATTTGGGAAGCAATATGTCGGGCCCGGCTTTGGGGCCCACGATGTCAATCGGGCAGATTTTGAGCCGGAAATTGCTTTTGACAGAAGAGTATTCTGGCAAAACCGAGATGAAAAGGAAGGTTTCTTTGGCGCAAATGTTGAGTAAGCCTACTAATGGTGGTGGTGGTGATGGTAGGAAACGACGATCAGGGAAGAGAAAGAAGTTCGGGTTTGGTAGGATTTCGTTTTTGGTGACAAAGCCGAGCAAGAAGAAGAAGAAACATAGCGTTGTTTCACGGCTTTCATGTGCCACTGATTAG	1656	43.18	MEALDSDHNVGPEFQETGSDPKQSNDGCARAEVDTSAPFESVKEAVSRFGGVGFWKPHHKHLHASQVLILYIFLVLNLLILNKQWDVTEEEFDAAKAEEQAVQLANDLVAKERETLEVLKELQTTKTTVEELKVKLQKESATVKPTVNDPVPKEGNDKNALEPEPQSAGNSLMCPSAPGFILMELKQAKLNLTRTTNDLADIRSTVEMYNKMIKKERLELEKTRQRLSSNSLKISSFKENVDFPRELHRLTSETDEFKRVGEVAKSEVLTALNQIKQTKRNIKTVETRLTAARKLKEAARATEALARSEIKSISKSQTLSEGEGVTLSNEEYSCLKLKALEADEALIRKVNESMVKVNESELTKSEILNRVEEAAEEVKNSKMVLEEALSKVETATSEKLKAEEALRNWRSDHGQRRKSTVQNSAKFKNCSSRANTRLLDVNGPHLLDVNGAHLGSNMSGPALGPTMSIGQILSRKLLLTEEYSGKTEMKRKVSLAQMLSKPTNGGGGDGRKRRSGKRKKFGFGRISFLVTKPSKKKKKHSVVSRLSCATD	551

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03529	551	Coils	Coil	275	295	-	-
	Smso1g03529	551	Coils	Coil	94	114	-	-
	Smso1g03529	551	Coils	Coil	185	230	-	-
	Smso1g03529	551	Coils	Coil	357	412	-	-
	Smso1g03529	551	Coils	Coil	119	139	-	-
	Smso1g03529	551	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	31	140	-	GO:0005829(PANTHER)\|GO:0009903(PANTHER)\|GO:0009904(PANTHER)
	Smso1g03529	551	MobiDBLite	consensus disorder prediction	141	170	-	-
	Smso1g03529	551	MobiDBLite	consensus disorder prediction	498	520	-	-
	Smso1g03529	551	MobiDBLite	consensus disorder prediction	1	34	-	-
	Smso1g03529	551	Pfam	Weak chloroplast movement under blue light	31	139	IPR008545	-
	Smso1g03529	551	Pfam	Weak chloroplast movement under blue light	189	416	IPR008545	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03529	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337960	Smso28g00533	Smso1g03529
	346419	Smso20g01783	Smso1g03529
	357527	Smso1g03529	Smso28g00533
	429006	Smso1g03529	Smso20g01783
	429007	Smso1g03529	Smso28g00533

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4967687	Smso	Smso1g03529	Smso-Chr1:119679498	Smso25g02512	Smso-Chr25:61755649
	5025330	Smso	Smso1g03529	Smso-Chr1:119679498	Smso20g01783	Smso-Chr20:60492191
	5027930	Smso	Smso1g03529	Smso-Chr1:119679498	Smso28g00533	Smso-Chr28:15995393
	5028282	Smso	Smso1g03529	Smso-Chr1:119679498	Smso29g01562	Smso-Chr29:42493434