Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03556	ATGGGACTTTGCTTCTCGTCGGCTCCAATTGATGAAGATGAGTCCGAGAGTCATGCTCAGTTTGAGGGAGGTAATGTGACTCTCATCACTACCAAGAATGCTTGGGACGAAAAGCTGTCAGAAGCGAAGACTCAAGGAAAAGTAGTGATTGCCAACTTCAGTGCATCTTGGTGTGGTCCATGCAAAGCAGTTGCACCGCACTACGTTGAGCTGTCAGAGAAGTATCCTTCTCTTATGTTTCTGACCATAGATGTTGATGAATTAACGGATTTTAGCACACAATTGGAAGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAAATGGTCAACAGATTGACAGGCTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCACCATTGTTGATTCACAGGTCCCCACTGCTCACAAGTAA	423	43.97	MGLCFSSAPIDEDESESHAQFEGGNVTLITTKNAWDEKLSEAKTQGKVVIANFSASWCGPCKAVAPHYVELSEKYPSLMFLTIDVDELTDFSTQLEVKATPTFFFFKNGQQIDRLVGANKPELQKKITTIVDSQVPTAHK	140

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03556	140	FunFam	Thioredoxin	23	132	-	-
	Smso1g03556	140	SUPERFAMILY	Thioredoxin-like	21	130	IPR036249	-
	Smso1g03556	140	ProSitePatterns	Thioredoxin family active site.	50	68	IPR017937	-
	Smso1g03556	140	Gene3D	Glutaredoxin	1	138	-	-
	Smso1g03556	140	ProSiteProfiles	Thioredoxin domain profile.	20	132	IPR013766	-
	Smso1g03556	140	Pfam	Thioredoxin	27	128	IPR013766	-
	Smso1g03556	140	CDD	TRX-family	37	127	-	-
	Smso1g03556	140	PRINTS	Thioredoxin family signature	49	57	-	-
	Smso1g03556	140	PRINTS	Thioredoxin family signature	96	107	-	-
	Smso1g03556	140	PRINTS	Thioredoxin family signature	57	66	-	-
	Smso1g03556	140	PANTHER	THIOREDOXIN	22	129	IPR050620	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03556	K03671	thioredoxin

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337965	Smso28g00524	Smso1g03556
	346423	Smso20g01802	Smso1g03556
	357522	Smso1g03556	Smso28g00524
	429015	Smso1g03556	Smso20g01802
	429016	Smso1g03556	Smso28g00524

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4967707	Smso	Smso1g03556	Smso-Chr1:120503877	Smso26g02864	Smso-Chr26:63334182
	5018216	Smso	Smso3g00972	Smso-Chr3:25711603	Smso1g03556	Smso-Chr1:120503877
	5018434	Smso	Smso3g02055	Smso-Chr3:107162222	Smso1g03556	Smso-Chr1:120503877
	5021475	Smso	Smso16g01341	Smso-Chr16:72091794	Smso1g03556	Smso-Chr1:120503877
	5025335	Smso	Smso1g03556	Smso-Chr1:120503877	Smso20g01802	Smso-Chr20:61092010
	5027937	Smso	Smso1g03556	Smso-Chr1:120503877	Smso28g00524	Smso-Chr28:14769470
	5028287	Smso	Smso1g03556	Smso-Chr1:120503877	Smso29g01572	Smso-Chr29:42729654