Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03558 | ATGGAGCATGAAAAGAAGAAGAGAGGGAAGAAAAAGAAGAACAAGCAGGGAAAAACAAGTGTATCTGCTGGCGTTGGGGAATTGACTACAGAAAATAACAATCATGCAAATGTGGCAAATCAGAATCATCAGAACGTTAATTCTGATAGTTCGGATGTGCCGAAAAGGGGTCTGCAGCAAGCAGTTGTGGATTCAGATAGAGAGTCCATCAGTGGAGCTGAAACTTCCCGTTCAGTTGAGGCTGAGAAGTCCTATTGGTTAAACCGAGAGGCTTCCCTAGAACAAAAAATCAAAGAACTACAAGAGCAATTGGACATACATGTACAAAGGGAGGCTGATCTTGAGAGAAATATTTCACAATCACAGAAAGAAAGAAATTCATGGCATCATAAAGAGACTGAGCTCGAGGCAACAATTTCACAATTACAAACAGAAAAACGCGCTTGGCTTCAAAAAGAGGCTGATTGTGAAGAAAAATTGAATCGGTTGGTTGAAGAAACATCTACTCTGCGATCAATGGAGGCTTGCTTCGAAGAAAAACGTATCCAGATGGAAACAGAAAAGGTTAACTTGGCACAAAGAGAGAACTCTGCAGCAGAAACAATTGCATCTTTGATCAAGGACAATGCAAAATTACAAGCACAAGTGATCGAGCTGGAAACATCTTCAAATAATATTTCCCACCAAAATCAGCAGCTGAAAGAACATGTTTCTGATCTTCAGTCAAAGATTCAGGATCTTGAAAATTCTGTAGCTACCCATTTATCTTCTGAAAGGACAAAGAACGTTACTGCATACGAGGACATGAATTTACAGTTGGAATCTGCACAAGCACTTGTTGCAAAATTGCTTTCTGAAAATGATATTTTAGTTGAGAAGGTCAACGTCTTAAAAACCGAGCTTGACCAAAAGACTGCAACAACCCAATCATCTTCACCTATTAAACCCGTTGACCCGTTAGTCAAAAATCCCAAAGCTGCTGACATGGATGAAACTTCAACTACTGAAACTGATTCAATGCCTTCATCAGCTGAAACTGACACAGTCAGCAACGTGGGCCCATCAGATACACTTGTGAATCATATGCATTCAGAGGGTTCTGATTTGAATCAAATTTCTCGCGTAAGCATGGAGTCTGGAGAAATTGTGCAGATTTCATTAAACGAGATAGATGTCGCAGCTGCCACATCAGCAATCTATGTTCCCGAGGATGCCGACCCGGTGCCTCTCACAGACGCTCCGCTCATCGGTGCTCCATTCAGGTTTATATCGTTTGTTGCCAGATATGTGAGTGGGGCCGACTTGGTTCAGAAGTAA | 1317 | 41.46 | MEHEKKKRGKKKKNKQGKTSVSAGVGELTTENNNHANVANQNHQNVNSDSSDVPKRGLQQAVVDSDRESISGAETSRSVEAEKSYWLNREASLEQKIKELQEQLDIHVQREADLERNISQSQKERNSWHHKETELEATISQLQTEKRAWLQKEADCEEKLNRLVEETSTLRSMEACFEEKRIQMETEKVNLAQRENSAAETIASLIKDNAKLQAQVIELETSSNNISHQNQQLKEHVSDLQSKIQDLENSVATHLSSERTKNVTAYEDMNLQLESAQALVAKLLSENDILVEKVNVLKTELDQKTATTQSSSPIKPVDPLVKNPKAADMDETSTTETDSMPSSAETDTVSNVGPSDTLVNHMHSEGSDLNQISRVSMESGEIVQISLNEIDVAAATSAIYVPEDADPVPLTDAPLIGAPFRFISFVARYVSGADLVQK | 438 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03558 | 438 | MobiDBLite | consensus disorder prediction | 328 | 350 | - | - | |
| Smso1g03558 | 438 | Gene3D | - | 133 | 309 | - | - | |
| Smso1g03558 | 438 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Smso1g03558 | 438 | Coils | Coil | 266 | 293 | - | - | |
| Smso1g03558 | 438 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
| Smso1g03558 | 438 | MobiDBLite | consensus disorder prediction | 304 | 350 | - | - | |
| Smso1g03558 | 438 | MobiDBLite | consensus disorder prediction | 18 | 55 | - | - | |
| Smso1g03558 | 438 | Coils | Coil | 230 | 250 | - | - | |
| Smso1g03558 | 438 | Coils | Coil | 83 | 124 | - | - | |
| Smso1g03558 | 438 | Coils | Coil | 202 | 222 | - | - | |
| Smso1g03558 | 438 | Coils | Coil | 132 | 152 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03558 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 337966 | Smso28g00523 | Smso1g03558 | |
| 357521 | Smso1g03558 | Smso28g00523 | |
| 429017 | Smso1g03558 | Smso28g00523 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4967708 | Smso | Smso1g03558 | Smso-Chr1:120522056 | Smso5g00163 | Smso-Chr5:2128926 | |
| 5027938 | Smso | Smso1g03558 | Smso-Chr1:120522056 | Smso28g00523 | Smso-Chr28:14738460 |