Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03566 | ATGCATATGAGGCTTCAATTTCGAAGTCCAGTGAAGCTTGTTTTGCTAATTTGCTTCTGCTGGTGGCCAATTGTTGAATCTCAAATATCTAATCCTCTACCAAAGCCTGCAAGGGCCCTTGATGCAACCCTACAGGACTATGCATATCGTGCGTTTATTAATCCACGTACTGGTATTCCCTTTAATGGCATTGTCCCGCCATATTTGACAGGAATTGAGATATCAGCAATGAGGCTCAGAAGCGGTAGTCTGTATCGTCGAGGCGTTAAAACCTTTAAAGAGTTCTTAATTCCGGTTGGTTTAAGAGAGCAGCCATATGTGGAGCGACTTGTTCTGGTGTATCAAAATTTAGGAAATTGGTCCACAACTTATTACTCTTTACCTGGTTATGTTTATCTAGCTCCGATATTAGGTCTTCTTGCTTATAATGGTTCAGATTTGTCAGCTTCTAATCTACCAGAACTTGACTTTTGGGCTTCTGAGGAAGTCATTACGATAAATTTTGGAAGAATACGCCCCATACCAGTTGGTTTGGTTGCAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAATCTCACAAACTTGTTATCTGGGAATGTATGTTCAACCACTGAACAGGGGCATTTCTCCATTGTGGCTGAATCAGCTGTCCCTCCTGTTCCAGTACCTCCTGCATCACCTGAACCTGCACCCTCTGAACCTGCACACAGTAGTAGAAAGAACAATGAGCCTAGGATTTGGGGTATTATTGGCGCGGTAACTGGTGGAACTGCATTGTTGGTGTTGTTGGCATTGTTGATATTGTGGGCTTGGCGGTACAAAAAGAGAAATCGAATGCGTGAATTGGAAAGGGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGGATTTTGAAAGCGAATTTGGTGCTTGA | 966 | 43.58 | MHMRLQFRSPVKLVLLICFCWWPIVESQISNPLPKPARALDATLQDYAYRAFINPRTGIPFNGIVPPYLTGIEISAMRLRSGSLYRRGVKTFKEFLIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYVYLAPILGLLAYNGSDLSASNLPELDFWASEEVITINFGRIRPIPVGLVAKCAWFDLHGQVNLTNLLSGNVCSTTEQGHFSIVAESAVPPVPVPPASPEPAPSEPAHSSRKNNEPRIWGIIGAVTGGTALLVLLALLILWAWRYKKRNRMRELERAADAGEALRMTRIGSMRAPFALATRTMPDFESEFGA | 321 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03566 | 321 | Pfam | Protein of unknown function (DUF1191) | 36 | 214 | IPR010605 | - | |
| Smso1g03566 | 321 | MobiDBLite | consensus disorder prediction | 221 | 241 | - | - | |
| Smso1g03566 | 321 | PANTHER | PROTEIN, PUTATIVE (DUF1191)-RELATED | 15 | 319 | IPR010605 | GO:0016020(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03566 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 147316 | Smso17g00123 | Smso1g03566 | |
| 149169 | Smso1g03566 | Smso8g00129 | |
| 337968 | Smso28g00520 | Smso1g03566 | |
| 357519 | Smso1g03566 | Smso28g00520 | |
| 429020 | Smso1g03566 | Smso28g00520 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4967715 | Smso | Smso1g03566 | Smso-Chr1:120638643 | Smso29g01142 | Smso-Chr29:22647622 | |
| 5024253 | Smso | Smso1g03566 | Smso-Chr1:120638643 | Smso17g00123 | Smso-Chr17:1386938 | |
| 5027940 | Smso | Smso1g03566 | Smso-Chr1:120638643 | Smso28g00520 | Smso-Chr28:14584588 | |
| 5029657 | Smso | Smso1g03566 | Smso-Chr1:120638643 | Smso8g00129 | Smso-Chr8:1755635 |