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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03576 ATGGAAGCTATTAAACACATCACCTCCATCTTCTTCCTGCTTCTTTTCATCTTCAATTCAACTTCAGGTGCCATAGAAGAAACCACAATTGAAGAACATGTAATGCAACTACTTCCAGTGCCGGTGCCAGTGGAAATGGGGAGGAGTGAATACAGGATGGCTGCGGAAATAGACGGCGGCGGGCGGCGGAGGAAACTCGGTCCTTTTCAGGTATGTTTGGTGTGCAGGTGTTGTGTGATGGCCACCGATCCATCCACATGTTCCAACATGCCGTGCTGTTTTGGCATAGATTGTCAGCTTCCGAACAAGCCGTTTGGTGTTTGTGCTTTCGTCCCCAAGACCTGCAACTGTACCACTTGTGCTGCTCCATAA 372 48.92 MEAIKHITSIFFLLLFIFNSTSGAIEETTIEEHVMQLLPVPVPVEMGRSEYRMAAEIDGGGRRRKLGPFQVCLVCRCCVMATDPSTCSNMPCCFGIDCQLPNKPFGVCAFVPKTCNCTTCAAP 123
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03576 123 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 120 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03576 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4952739 Smso Smso14g00534 Smso-Chr14:18975890 Smso1g03576 Smso-Chr1:120822682
4967724 Smso Smso1g03576 Smso-Chr1:120822682 Smso25g02802 Smso-Chr25:65140891
5013951 Smso Smso1g03576 Smso-Chr1:120822682 Smso11g00493 Smso-Chr11:25598471