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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03599 ATGGCGTCAAAAATAGTTTCAGTCTCTAAACTCAACCGAATCTTGTTCGCAACACCCAGATACCAAGCAATCTCACGATCAGCCTACTCGTCCGCATCTTCCGGTGATCAAGAAGTGCAAGATGACGACGCCATGACGCAAGGAGTCGAAACGCAGGGTGAAACCAGAGACCCCAAACCAGATGATAAGGACAACATTATCCCAACAAGAGAAGACGATCATTACGTGCGCCCCAAGACGGTGCCGTCAAATTTCTCCTCGTCAAAGCTACAAACCCCCGGCGTCAACACCCCAATCGATCCCCACATCCAGCAAAAGCGCACCCAATCAACCAAACCGAAGGAAGAACTGAGCTGCGCGGGGCTGGACGGTTCGCCGTGGCCGGAGGAGGAGAGTGCTAGTCGGGACGAGCAAGAAGAGGATGACAAAGAGTACTTTAAGGACCACAAGGCATCTCCGTTGTCGAAGATTGAGATGGGTGATACGAGGAAGCCGCTTGAAAAAGTGGCTCATGCGACGGCGGGTGGTTATTTTGGTGATGAGAAGGTGATGACGTGGATGCCGGAGCAGGTTGATACGGCGGAGGAGAGTCTACTGAGGGCGACGGAGATGTTTCGGGAGGCGGCTGCGAGGGGGGTTCCGGAGTGGCCTCATTCTAGGAGGTTGAGAGAACTTCGGGGTGAGGATTGGTGA 693 53.82 MASKIVSVSKLNRILFATPRYQAISRSAYSSASSGDQEVQDDDAMTQGVETQGETRDPKPDDKDNIIPTREDDHYVRPKTVPSNFSSSKLQTPGVNTPIDPHIQQKRTQSTKPKEELSCAGLDGSPWPEEESASRDEQEEDDKEYFKDHKASPLSKIEMGDTRKPLEKVAHATAGGYFGDEKVMTWMPEQVDTAEESLLRATEMFREAAARGVPEWPHSRRLRELRGEDW 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03599 230 MobiDBLite consensus disorder prediction 54 78 - -
Smso1g03599 230 MobiDBLite consensus disorder prediction 80 106 - -
Smso1g03599 230 PANTHER OS07G0675200 PROTEIN 10 230 - -
Smso1g03599 230 MobiDBLite consensus disorder prediction 26 53 - -
Smso1g03599 230 MobiDBLite consensus disorder prediction 139 163 - -
Smso1g03599 230 MobiDBLite consensus disorder prediction 26 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03599 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337980 Smso28g00490 Smso1g03599
357507 Smso1g03599 Smso28g00490
429037 Smso1g03599 Smso28g00490
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5027955 Smso Smso1g03599 Smso-Chr1:121209589 Smso28g00490 Smso-Chr28:13710248