Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03605 | ATGGAATCGAATAACACGAGATTTGCTTTGACTGTTCTTTTATTGTCGGCTGTCGTGATGGTTGCATCTGCTTCGGCTGACAGTGGTTATGGAAAGTCGCAACTCGAGGGGTACATGAAACCAAAACCTGCTACCCCAAAAGAGCACACGGGTTATGAAAAACCTGATCCTAAGGTACCAACAAAGTCTGTGTTACCAAAAGAGGAGCATGGAGCGTATGAGAAGACTATTCCTAAGATACCAACAAAGCCCGTGATACCAAAAGAGGAGCATGGAGCATATGAGAAGCCCAAGTCGAAGTTGCCAACAAAGCCCGTGATACCAAAAGTGGAACACGGTGCCTATGAAAAAGGTTATCCTAAGTTACCAACAAAACCCGTGATACCAAAAGAGGAACATGAAGCCTATGAGAAGACTGGTCCTAAGTTGCCAACAAAACCCGTGATACCAAAACAGGACCCTAAAAGTTATGAAAAAAGTTATCCTAAGATGCCAACGACCCAAAAGCCGTTGGTACCCAAGGTGCCAGAACACCGAAAGAACATAGCCGTTCAAGGTCTTATTTATTGTAAATACGGTTCCAAACTCCTCCCACTTCAAGGAGCGACCGCGAGAGTGACTTGTTTGGCAGTACACAAGAACGGATATGAATCCGCACCATTCTCATTCTCGAGTTGTCCAGCAAACGAGAAGGGTTACTTCTTGGCCAAGATACCATCATCGACGCTCGTAAAAGACGATCTATGGGAGATCACAGAGTGCAAGGCTTTCCTTGAAAACTCGCCATGGACGAGCTGCAAGGTTCCAGAAGATACCAACGGAGGAATTAAGGGTGCTCGTCTTACATTTTCTCGTCATCTCAATAGCAACGGATATTGTTTGTCATCGGTTGGTTGCTACTGCGTAACAGTTACGACTTCTCCCTATTGCCACCAATGGCACGGTTCAGGTTGCCACGTCTCAGTTGTGATTGAGCTGGTGGTTGGATTGCGACTAATGGCGCTCAGCAGGAAGTTTCTACTGAGCATAGTCCCCACTGCTGGTATCATGAACCTGAATGACAGACTCAAGGTGTATGTTGATGATCAGACGGCTGTAAAAGAAGACAACCCACCAACCCAGTTGATGAAGAAAGAAGGAAAACACACAGAAGATGAATTGGTCAAGAAACATGAAATCCCACTTGTTCAATCAATTGAAGACAGTGAGAAAGATGTTACATTGACGAATGAGGTAATTGAGTGTATGCAGGAGGAACCGACACCAGAAGCTAAAAGATCAGTAACCAGAAGATTGAAGAAAATATGGAGGAAAATCACACGATTTTACGCAAAAATCGGATGA | 1344 | 44.64 | MESNNTRFALTVLLLSAVVMVASASADSGYGKSQLEGYMKPKPATPKEHTGYEKPDPKVPTKSVLPKEEHGAYEKTIPKIPTKPVIPKEEHGAYEKPKSKLPTKPVIPKVEHGAYEKGYPKLPTKPVIPKEEHEAYEKTGPKLPTKPVIPKQDPKSYEKSYPKMPTTQKPLVPKVPEHRKNIAVQGLIYCKYGSKLLPLQGATARVTCLAVHKNGYESAPFSFSSCPANEKGYFLAKIPSSTLVKDDLWEITECKAFLENSPWTSCKVPEDTNGGIKGARLTFSRHLNSNGYCLSSVGCYCVTVTTSPYCHQWHGSGCHVSVVIELVVGLRLMALSRKFLLSIVPTAGIMNLNDRLKVYVDDQTAVKEDNPPTQLMKKEGKHTEDELVKKHEIPLVQSIEDSEKDVTLTNEVIECMQEEPTPEAKRSVTRRLKKIWRKITRFYAKIG | 447 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03605 | 447 | Pfam | Pollen protein Ole e 1 like | 184 | 278 | - | - | |
| Smso1g03605 | 447 | MobiDBLite | consensus disorder prediction | 42 | 70 | - | - | |
| Smso1g03605 | 447 | MobiDBLite | consensus disorder prediction | 29 | 70 | - | - | |
| Smso1g03605 | 447 | PANTHER | OS01G0164075 PROTEIN | 10 | 301 | - | GO:0071944(PANTHER) | |
| Smso1g03605 | 447 | MobiDBLite | consensus disorder prediction | 135 | 172 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03605 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 346431 | Smso20g01822 | Smso1g03605 | |
| 429041 | Smso1g03605 | Smso20g01822 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4958175 | Smso | Smso16g02090 | Smso-Chr16:85238661 | Smso1g03605 | Smso-Chr1:121290993 | |
| 5025348 | Smso | Smso1g03605 | Smso-Chr1:121290993 | Smso20g01822 | Smso-Chr20:61674974 | |
| 5027959 | Smso | Smso1g03605 | Smso-Chr1:121290993 | Smso28g00486 | Smso-Chr28:13645893 | |
| 5028299 | Smso | Smso1g03605 | Smso-Chr1:121290993 | Smso29g01590 | Smso-Chr29:42930415 |