Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03640	ATGGGGTTCCCGGAGGAAGTGTTGGAGCATGTGTTCTCGTTCATAACGTCGCATACGGACCGGAATGTTGTTTCATTGGTGTGTAAGTCGTGGTACGAGATCGAGAGGTGGTGCCGGAGGAGGATTTTCGTCGGAAATTGTTACGCCGTGAGTCCGGCGATGATGATTCGGAGGTTTCCGGAGGTGAGATCTGTGGAGTTGAAAGGGAAACCGCATTTTGCGGACTTTAATTTGGTGCCGGACGGTTGGGGAGGGTATTTTTATCCGTGGATCTGTGAAATGGCTAGGGCTTATCCGTGGTTGGAGGAGATTAAGCTTAAGCGGATGGTGGTTACGGATGACAACTTGGAGTTGATCTCGAAGTCGTTTAAGAACTTTAAGGTGTTGGTGTTGTCTTCTTGTGAGGGTTTCAGCACCCACGGACTTGCCGCCATTGCCGCCAATTGCAGAAATCTGAGAGAATTGGATTTACGGGAGAGTGAAGTGGAGGACTTGAGTGGTCACTGGCTCAGTCACTTCCCTGATTCTTGCACTTCATTGCAGTCCCTTAACATGTCTTGTTTGTCTTCTGAGGTGAGCTTTTCAGCCCTCCAACGCCTCATTGCTCGCTCGCCCAACCTAAAGACTCTTCGACTCAACCGTGCGGTTCCCCTTGAGAAACTCTCCACTTTACTGCGCCGCGCTCCACAGCTTGTTGAATTGGGTACTGGCGCGTATTCTGCTGAAATTCGACCTGATGTGTACGCAAATTTGACAGAGGCTTTCTCTAGATGCAAGGAAGTTAAGGGTCTTTCTGGATTTTGGGATGTTCTTCCTTCTTATCTTCCAGCTATTTATTCTGTTTGTTCTAGACTCACCTCTTTAAACTTGAGTTATGCGACTATACAAAGCCCCGATGTTACCAAAATCATCACCCAGTGTCCTAATCTGCAGAGTCTATCGGTACTGGATTACATTGAAGATACCGGGCTCAATGCCCTTTCTTTATCCTGTAAGGATTTAAGAGAACTCAGGGTTTTCCCATCTGACCCGTTTGTAGCCAATGCAAATGTTTCCTTAACAGAACAAGGTCTGGTTGCAGTTTCTGAAGGGTGCTCCAAGCTCCAATCTGTTCTTTACTTCTGTAGACAGATGTCAAATTCTGCATTGACCACCATTGCTAAGAACCGCCCTAACCTAACCTGTTTCCGTCTATGCATTCTTGAACCACGGGCCCCTGATTACCTAACCTTTGAGCCACTCGATGTCGGTTTTGGAGCCATAGTTGAGCACTGTAAACAACTTCAACGTCTCTCATTATCTGGGCTTCTCACAGACCGTGTGTTTGAGTACATTGGGAAATGGGCTAAGAAATTAGAGATGCTTTCCATAGCCTTTGCTGGTGATAGTGATTTGGGCTTGCATCATGTGTTATCGGGCTGTGACAGCTTACGGAAGCTTGAGATTAGAGATTGCCCGTTCGGGGACAAGGCTTTGTTGGCTAATGTTTCCAAATTGGAGACAATGCGATCCCTTTGGATGTCTTCGTGTTCGGTTAGTCTCGGTGCATGTAAGCGGCTGAGTCAGAAGATGCCTAGGCTTAATGTTGAAGTTATTGATGAGCAGGGAGACTTAGATTCCAGACCTGATAACTGTCATGTTGAGAAACTTTATATATACCGTACGGTTGCTGGGCCACGGTTTGATATGCCTAGCTTTATACGGACTATGGATCAAAACCCTACATATAGGAGCTAG	1737	46.75	MGFPEEVLEHVFSFITSHTDRNVVSLVCKSWYEIERWCRRRIFVGNCYAVSPAMMIRRFPEVRSVELKGKPHFADFNLVPDGWGGYFYPWICEMARAYPWLEEIKLKRMVVTDDNLELISKSFKNFKVLVLSSCEGFSTHGLAAIAANCRNLRELDLRESEVEDLSGHWLSHFPDSCTSLQSLNMSCLSSEVSFSALQRLIARSPNLKTLRLNRAVPLEKLSTLLRRAPQLVELGTGAYSAEIRPDVYANLTEAFSRCKEVKGLSGFWDVLPSYLPAIYSVCSRLTSLNLSYATIQSPDVTKIITQCPNLQSLSVLDYIEDTGLNALSLSCKDLRELRVFPSDPFVANANVSLTEQGLVAVSEGCSKLQSVLYFCRQMSNSALTTIAKNRPNLTCFRLCILEPRAPDYLTFEPLDVGFGAIVEHCKQLQRLSLSGLLTDRVFEYIGKWAKKLEMLSIAFAGDSDLGLHHVLSGCDSLRKLEIRDCPFGDKALLANVSKLETMRSLWMSSCSVSLGACKRLSQKMPRLNVEVIDEQGDLDSRPDNCHVEKLYIYRTVAGPRFDMPSFIRTMDQNPTYRS	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03640	578	CDD	F-box-AtTIR1-like	3	39	-	-
	Smso1g03640	578	Gene3D	-	1	39	-	-
	Smso1g03640	578	PANTHER	F-BOX-TPR REPEAT PROTEIN POF3	3	535	-	GO:0019005(PANTHER)\|GO:0031146(PANTHER)
	Smso1g03640	578	SMART	fbox-2	3	44	IPR001810	GO:0005515(InterPro)
	Smso1g03640	578	FunFam	Transport inhibitor response 1	40	570	-	-
	Smso1g03640	578	SMART	LRR-CC-2	307	330	IPR006553	-
	Smso1g03640	578	SMART	LRR-CC-2	123	148	IPR006553	-
	Smso1g03640	578	SMART	LRR-CC-2	474	498	IPR006553	-
	Smso1g03640	578	SMART	LRR-CC-2	365	389	IPR006553	-
	Smso1g03640	578	SMART	LRR-CC-2	425	448	IPR006553	-
	Smso1g03640	578	SMART	LRR-CC-2	177	203	IPR006553	-
	Smso1g03640	578	Pfam	F-box	2	41	IPR041567	-
	Smso1g03640	578	Pfam	Transport inhibitor response 1 protein domain	60	106	IPR041101	-
	Smso1g03640	578	Gene3D	Ribonuclease Inhibitor	40	570	IPR032675	-
	Smso1g03640	578	FunFam	Transport inhibitor response 1	1	39	-	-
	Smso1g03640	578	SUPERFAMILY	RNI-like	17	528	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03640	K14485	transport inhibitor response 1

Event-related genes

Select	Gene_1	Gene_2	Event_name
	147341	Smso17g00207	Smso1g03640
	149192	Smso1g03640	Smso21g02232
	149193	Smso1g03640	Smso4g02427
	149194	Smso1g03640	Smso8g00233

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:122034645	Smso4g02427	Smso-Chr4:41048076	dispersed
	Smso	Smso-Chr1:122034645	Smso17g00207	Smso-Chr17:2217558	wgd
	Smso	Smso-Chr1:122034645	Smso8g00233	Smso-Chr8:3096738	wgd