AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03673 ATGGCTTCTAATGGGTATCTTCCTACGCTCGTGTTTCGTCCAGAACAAGTATTAAACAAGGACTCTCAACGTCTTTTGCCTAATTATGAATTACGGGACGATGTCATACGTTCAAGACTCCTCAACATGGGCCCACAACAGAATGTGGGGCCATGTAAGCCGATAAGCGGGTTATTTGATAACAATCGTTTTGACCTGATTGGCCCGACTATTACAAAGCCTGCACTCATCAACATCCAAGATTGTTGCCCAAACTCAACACTTTTCAGCTTCAAGTTTCCTATGTCCAGATTAACTGAAGTAGAAAAAGATGGATTTGATTTGTTATCACTTTCTGACTTAACGGGCCTTCGGCCTGTGACAACTGATCACAAGCCGTATTTTCATGATATGGGTCAACTGAATTCTCAGCTGATTTATCAAAACCCAGAATTTGATTCCCGGAAACCTTACATCGATTTTGTTGGTGATTTGGTTCGACATTCTGAAATTAGAATTCATGAAGATGGGCAGGTGTCATTGATTGGCACTAAAACTGAAATAAAGGATATAATTTCAGTTCTTGCTGAGTTCTATATATCAAAGAATTCAACTAACTGGCGGAAGTCATTGGTACCGCAGTTTAATAGGCTGGATTATGATGAAACAAGCTATTACGGGTCTGCTTTCGAGCTTGAAACTGTGATCGTCGCTCCTCCAAAGAGTCCGGAGAAAATGAAACCGAAGCCATCACCAAAGAAGAAAGGAGCCCGTAACAAGACAATAATCAAGCACAGAAGTAACTACATTCGGGCCTGTGAAAGCCTTCTATCAATAATAGTCGACAAAAAAAGGAACGGGAAATCTGCAATTCCCGTGCTAAAGAAATCTGGCCCCGAGCTACCAAATCTGCTAACTCAGTTCTCAGCCAGCATCGCGGGAACAGGCATTGCGGTTCTTTTTTCGGTTATGTGTAAAGTAGGTAGTGGCAGGGTGCCATTTTGTTCATCAAAACTTCTCAACACGGGCCTCGGGCTGGGCCTGGTGTGGCTTTCATGGGCCGTGAACAGACTGAGGGATACGATCGTGATGATTAACAAGAACTCGAACAAGAAAAGGGGTTTGAAAGATGAAGATATGATGAAGAAATAG 1131 42.62 MASNGYLPTLVFRPEQVLNKDSQRLLPNYELRDDVIRSRLLNMGPQQNVGPCKPISGLFDNNRFDLIGPTITKPALINIQDCCPNSTLFSFKFPMSRLTEVEKDGFDLLSLSDLTGLRPVTTDHKPYFHDMGQLNSQLIYQNPEFDSRKPYIDFVGDLVRHSEIRIHEDGQVSLIGTKTEIKDIISVLAEFYISKNSTNWRKSLVPQFNRLDYDETSYYGSAFELETVIVAPPKSPEKMKPKPSPKKKGARNKTIIKHRSNYIRACESLLSIIVDKKRNGKSAIPVLKKSGPELPNLLTQFSASIAGTGIAVLFSVMCKVGSGRVPFCSSKLLNTGLGLGLVWLSWAVNRLRDTIVMINKNSNKKRGLKDEDMMKK 376
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03673 376 PANTHER OS05G0143300 PROTEIN 1 376 - -
Smso1g03673 376 MobiDBLite consensus disorder prediction 233 252 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03673 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
338010 Smso28g00445 Smso1g03673
357477 Smso1g03673 Smso28g00445
429079 Smso1g03673 Smso20g01736
429080 Smso1g03673 Smso28g00445
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr1:122571893 Smso20g01736 Smso-Chr20:58612991 wgd
Smso Smso-Chr1:122571893 Smso28g00445 Smso-Chr28:11896645 wgd
Smso Smso-Chr1:122571893 Smso29g01519 Smso-Chr29:41632999 wgd