Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03700	ATGGCGCCGGCAGCCGGCGTTTCTTCAGTGGCGGATCGAGTACCGGTGATGGTGCCGGCGACCGCGGCGGTGATGCCGGAGGCATTAGCTAAGGACGCGATAATCTCGTGGTTCCGAGGTGAGTTCGCTGCGGCGAACGCGATTATTGATGCGTTATGCGGCCATTTGTCTCAGTTTGAAGGTGGAAGAAGCGAGTATGAGTCGGTGTTTGCGGCTATACATCGACGCCGGTTGAATTGGATCCCGATTCTACAGATGCAGAAGTACTTTTCAATCGCTGATGTGACTCAGGAGCTTCAGAAAGCCGCGGAGGCGAAGGCGAAAGCGAAGTTAATAGGCGTCGAGAAGATCGTTGACGAAAAAGTTTCTCCGCCGTCGGTGGAGACGAAACATGAAATTCTGGTAGAGGAATCCGTCGATGTCAATGGTGATGACGGCGGGGAGGTTGTTGTTGATGATGAATCCACGAAGGATAATAATTCGCCGAAGAGCGGGATTACAGATGCAGGATTACATGAAGTGCATTCATCGGTGGGAAGCATAGAGATATGTTCAAACGAAGAAGATTGGGAGGCGCGGCGAGCTGAAATCAAGATGACAAAAGGGTTCATAGCCAAGGAGTCTGTAAAAGGGCATATGGTGAATGTTGTGAGAGGTTTGAAGTTGTATGAGGATATACTTAACAGCGGCGAGCTATCTAAGTTGACCGAATATGTAACTGAACTCAGAGTTGCTGGCCAAAATGGTGAACTCTCAGGTGATACTTTTATCAAGTACAACCAACAGTCAAAGGCAATCAAAAGAGAGCTTATTCAGTTTGGAGCTCCCATTTTTGGACAGATAAAAGATGAAGCTACAAATAATAAATCCCAAGATAGCAATATTGAGCCGATTCCTTCTACTCTTGAAGGTGTGATTGACCATCTGATTCAGTTTCATATAATTTCTGAAAACAGACGACCAAACAGTTGCATTATAAGCTTTTTCGATGAGGGGGAGTTTTCACAGCCTTTTTTGAAACCACCTCATTTAGAGCATCCCATATCTACACTTGTTCTACTTGATTCAACAATGGCTTTTGGGCGTACTCTAGTTTGTGATAATGATGGAAACTACAAAGGACCACTCATGCTTTCCCTCAAAGAAGGGTCACTCATAGTGATGAGAGGAAACAGTGCTGACATGGCACGTCACGTCATGTGTCAATCTCCAACTAAACGAATCAGTGTCTCATTTTTCAAAGTCCGAATAGACAACTACAACAAGAATCCACTCCCAAAAGATCCCATGGCCGGAGCCATGACCATATGGCAGCCCAGTCTTACAACTCCATTAATCACACCAACAACCGGACCACTCGATGGCTATGACTCGATCCATGTTCTCCCCAAATGGGGCGCAATCCGCACCCCACAACTGCTTATGTTAGCACCAGTCCGTCCAATGGTAATGAGTCCTAGAAGGCTGCCACGGGGTGGGACTGGTGTTTTCTTACCATGGAACGGCGGGTCAAAAAAACCCGCAAAGCATCTACCACCGCGTGCTCAACGAGGGCGTCTTCTTGCACTGCATGCCTCCACCGAAGCACACAAAATGGACCGCACCCCTGAATCGGGCATTAGCGTTGCTTGA	1632	47.49	MAPAAGVSSVADRVPVMVPATAAVMPEALAKDAIISWFRGEFAAANAIIDALCGHLSQFEGGRSEYESVFAAIHRRRLNWIPILQMQKYFSIADVTQELQKAAEAKAKAKLIGVEKIVDEKVSPPSVETKHEILVEESVDVNGDDGGEVVVDDESTKDNNSPKSGITDAGLHEVHSSVGSIEICSNEEDWEARRAEIKMTKGFIAKESVKGHMVNVVRGLKLYEDILNSGELSKLTEYVTELRVAGQNGELSGDTFIKYNQQSKAIKRELIQFGAPIFGQIKDEATNNKSQDSNIEPIPSTLEGVIDHLIQFHIISENRRPNSCIISFFDEGEFSQPFLKPPHLEHPISTLVLLDSTMAFGRTLVCDNDGNYKGPLMLSLKEGSLIVMRGNSADMARHVMCQSPTKRISVSFFKVRIDNYNKNPLPKDPMAGAMTIWQPSLTTPLITPTTGPLDGYDSIHVLPKWGAIRTPQLLMLAPVRPMVMSPRRLPRGGTGVFLPWNGGSKKPAKHLPPRAQRGRLLALHASTEAHKMDRTPESGISVA	543

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03700	543	SUPERFAMILY	Clavaminate synthase-like	212	412	-	-
	Smso1g03700	543	Gene3D	-	204	420	IPR037151	-
	Smso1g03700	543	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	29	531	IPR044842	GO:0003729(InterPro)\|GO:0006402(InterPro)\|GO:0032451(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03700	K10767	mRNA N6-methyladenine demethylase [EC:1.14.11.53]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	429082	Smso1g03700	Smso20g01738

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:123390968	Smso26g02682	Smso-Chr26:60257683	dispersed
	Smso	Smso-Chr1:123390968	Smso10g00734	Smso-Chr10:7676565	wgd
	Smso	Smso-Chr1:123390968	Smso20g00853	Smso-Chr20:14631094	wgd
	Smso	Smso-Chr1:123390968	Smso20g01738	Smso-Chr20:58940189	wgd
	Smso	Smso-Chr1:123390968	Smso29g01521	Smso-Chr29:41695522	wgd