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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03702 ATGCAAGAAAAGGGCAAACAAGATGATGGTTTAGGCCCTCTTGGCATTTGCCATAGGCTATTCAATTTCATCATGAATAGCATCCTTACTCGAGGTACAAGACGCATTGCATTGGGTACAAACAATGCAGCATCACCTCAAGACGACGAAACTCGATCTTTTGAAGCAAGTCATACGGGCCAAGACAAGGTGACCAGACCTGAAAGTCATGAACTACAAGTTGAGTTTAGACACACCAACGGGCCAATAGTTAATCAAACTAGTAACACTTCGGGTCAAATCTTGGTCCAAGAAAACATGAACTCAACACGAGCCCGTAAGGAAACGGATTCGCAAGATCAAGGTAAGGGCAATGGTGATCACGAGAACGCAACAAAAAAGTCAACGTTGACCATTGTAGATGGTGAGAATTTGCCTGGAAGGAAGCATCATCTTCTGAGTGTTGCTTCTAATATAAATGAGAAAGCTGATGCATTCATAAGGAGCAGAAAGGAAGCCATGGATAAGACTTTGAACATGAAACAGACAAATGATGTGTAA 540 42.22 MQEKGKQDDGLGPLGICHRLFNFIMNSILTRGTRRIALGTNNAASPQDDETRSFEASHTGQDKVTRPESHELQVEFRHTNGPIVNQTSNTSGQILVQENMNSTRARKETDSQDQGKGNGDHENATKKSTLTIVDGENLPGRKHHLLSVASNINEKADAFIRSRKEAMDKTLNMKQTNDV 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03702 179 MobiDBLite consensus disorder prediction 101 130 - -
Smso1g03702 179 MobiDBLite consensus disorder prediction 103 123 - -
Smso1g03702 179 MobiDBLite consensus disorder prediction 40 68 - -
Smso1g03702 179 MobiDBLite consensus disorder prediction 51 68 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03702 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
338012 Smso28g00439 Smso1g03702
357475 Smso1g03702 Smso28g00439
429085 Smso1g03702 Smso28g00439
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr1:123400184 Smso28g00439 Smso-Chr28:11702646 wgd