Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03717 | ATGCAAATCCGATTGGATCAGGAAATCCAAAGTCCAAATCGTAAAAAGTCGCGAATTCTCTGGAAACCACCACAATCGATGGCTACACGTGTCCTTCTACCACAATTCAATTCTACCTTCACCAATACCACCATTTTCCTGAGCCTAAACCCCCGTCTACCTACCACCACCAGAAGCCGATTCTCAGTTCTCTCAATGGCGGAATCCAACCGTACCACCGTCCTCGTCACCGGAGCTGGCGGCAGAACTGGTCAGATAGTTTATAAGAAGCTGAAGGAGAGGTCAGGGGAGTATATTGCGCGAGGATTGGTTAGAACGGAGGAGAGTAAGGAGAAAATTGGTGGAGACGACGACGTTTTGATAGGAGATATAAGGAATGTGGACAGCGTTGTTCCTGCTGTTGAAGGCGTAGATGCTGTTGTGATTCTGACGAGTGCTGTCCCCAAAATGAAACCTGGTTTTGATCCAAGTAAAGGTGGAAGGCCTGAATTCTATTTTGAAGAGGGATCATATCCTGAACAAGTTGACTGGGAAGGGCAAAAGAATCAGATTGATGCTGCTAAAGCTGCTGGAGTGAAGCAAATTGTTCTTGTTGGCTCCATGGGTGGAACCAATCTTAACCACCCTTTAAACAGCCTGGGAAACGGGAATATACTGGTCTGGAAGAGAAAGGCTGAACAGTATCTAGCAGACTCCGGGATTCCATACACCATTATAAGGGCTGGGGGTTTGCAAGACAAGGAAGGTGGTGTTCGGGAGCTGCTAGTCGGAAAAGATGACGAGCTTCTCGAGACTGAAACCAGAACCATTGCCAGACCCGATGTGGCTGAAGTCTGTATACAGGCGTTGCAATTCGAGGAGGCGAAATTCAAGGCGTTTGATCTTGCATCCAAACCCGAGGGAAGTGGAACGCCGACAAAAGACTTCAAAAGCTTATTTTCCCATGTCACTACTCGGTTTTAA | 963 | 47.35 | MQIRLDQEIQSPNRKKSRILWKPPQSMATRVLLPQFNSTFTNTTIFLSLNPRLPTTTRSRFSVLSMAESNRTTVLVTGAGGRTGQIVYKKLKERSGEYIARGLVRTEESKEKIGGDDDVLIGDIRNVDSVVPAVEGVDAVVILTSAVPKMKPGFDPSKGGRPEFYFEEGSYPEQVDWEGQKNQIDAAKAAGVKQIVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELLVGKDDELLETETRTIARPDVAEVCIQALQFEEAKFKAFDLASKPEGSGTPTKDFKSLFSHVTTRF | 320 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03717 | 320 | Gene3D | - | 69 | 320 | - | - | |
| Smso1g03717 | 320 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 72 | 297 | IPR036291 | - | |
| Smso1g03717 | 320 | CDD | SDR-a5 | 73 | 295 | - | - | |
| Smso1g03717 | 320 | PANTHER | NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED | 67 | 320 | IPR044163 | GO:0009507(PANTHER)|GO:0016491(InterPro) | |
| Smso1g03717 | 320 | Pfam | NAD(P)H-binding | 78 | 284 | IPR016040 | - | |
| Smso1g03717 | 320 | FunFam | Uncharacterized protein At5g02240 | 70 | 320 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03717 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 338016 | Smso28g00429 | Smso1g03717 | |
| 357471 | Smso1g03717 | Smso28g00429 | |
| 429094 | Smso1g03717 | Smso28g00429 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:13348366 | Smso1g03717 | Smso-Chr1:123711385 | dispersed | |
| Smso | Smso-Chr1:123711385 | Smso28g00999 | Smso-Chr28:47267887 | dispersed | |
| Smso | Smso-Chr1:123711385 | Smso28g00429 | Smso-Chr28:11446125 | wgd |