AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03719 ATGCCGTCATTGCGCTTCCCATTCTCGTTTTCTCAGCCCGCCAACACGCGCTTTCCCTCCGGCGCAACAATCGCCTGCTCCGTCGCCGTATCCGCCGCCGTTGGCGCCGGCATTTCAGCCGGCATTTCCATCTCACAAAACTCCAATTCATCTCTTCACAACGCACTCAACTCCTTCATTTCCAATTTCTCACGCTCTTCTCCCCTATGGGGATCACTGTCACTATCCGACGGCCCGAACGCCGTAGTCACCGAATCAAAGACCGGCGTTTCGTTTCCGGCGGTTTTGAAGGACTCTCAGGGACTTCTAGGGATTGGATTGAGGAGGAAGGCCGTGTTTGGGCTGAAGAACATCGATGTTTACGCTTTCGGTGTGTATGCTGATGATAATGAGATAAAGAGCTTTGTAAGTGAGAAATATGGAACGCTCTCAACGTCTGAACTGAAGAACAAGGACATCACTCAAGATTTGATGGAAAGTGATATAAGTGTTACAGTTAGGCTGCAAATAGTTTATGGAAAACTTAGCATTCGTTCTGTTCGCAATGCTTTTGAAGATTCTGTGGGAAACAGATTAAAGAAGTTTGGTGGATCTGACAACAAGGAATTACTTCAAAAATTCACTTCCCAGTTTAGAGACGAATACAAGATTCCTCGTGGATCGATCATCGACCTCTCCAAGGAAAAAGGCTATGTGCTCCGAACCGCTATTGATGGCAAAGAGATAGGAAGCGTCGAGAGCCAACTGTTATGTCGGTCAATCTTGGATCTTTATATTGGTGATGACCCATTTGACTCAAAAGCGAAAGAAGACATCGACCTCAAACTGGTTTCCACCATTACAAAGTAA 849 46.41 MPSLRFPFSFSQPANTRFPSGATIACSVAVSAAVGAGISAGISISQNSNSSLHNALNSFISNFSRSSPLWGSLSLSDGPNAVVTESKTGVSFPAVLKDSQGLLGIGLRRKAVFGLKNIDVYAFGVYADDNEIKSFVSEKYGTLSTSELKNKDITQDLMESDISVTVRLQIVYGKLSIRSVRNAFEDSVGNRLKKFGGSDNKELLQKFTSQFRDEYKIPRGSIIDLSKEKGYVLRTAIDGKEIGSVESQLLCRSILDLYIGDDPFDSKAKEDIDLKLVSTITK 282
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03719 282 SUPERFAMILY Chalcone isomerase 83 281 IPR036298 GO:0016872(InterPro)
Smso1g03719 282 Gene3D - 85 258 IPR016088 -
Smso1g03719 282 Gene3D - 131 272 IPR016089 -
Smso1g03719 282 Pfam Chalcone isomerase like 102 272 IPR016087 -
Smso1g03719 282 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 280 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03719 - -