Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso1g03725	ATGCCGACCAACTTCGAACGTAATATCAACCTCTGCTTCACCACCATCAAACGCCACCAATCCCCACCACCTCCCCCCACCCGCCACGGCCACCGTCACCGCCGCTGCCACTCCGAAACCACCCTCACCAAAACCTTCAATTCTCTCTACGAGTACGACATCCCCCCCGCCTCCGACTCCGACGACGGCTCATCCACCGCCGCCGCCGCCGACTTCTCCACTGTCATGGCCTCCGATCGGTTCTTCTTCTCTTCCCCCGGCCGCTCCAATTCCATTATCGAATCCTCCTCCCACTCCACCTCCTCCCTCGCTTCCACCTCCTTCACGCCGGAAGATCCAGCCGGCGACTTGTTCGAGAACGTCGGTGGCGGCGTGGCGATCCCTACGATCTCGCCGGACCCGTACTTCGATTTCAGAAAATCGATGCAGGAAATGGTGGAGGCACGTGACCTCATTGATGTCCGTGCCAACTGGGATTATTTGCACGAGCTTCTCACGTGCTATCTTGACTTGAACCCCAAGAGCGCTCATAAGTTCATTGTCGGAGCGTTTGCTGATCTTCTTGTTAGTCTCATGGCGGGTTCGGAAACCGGTGGGGGTGGCCGGAATATTTGA	615	57.89	MPTNFERNINLCFTTIKRHQSPPPPPTRHGHRHRRCHSETTLTKTFNSLYEYDIPPASDSDDGSSTAAAADFSTVMASDRFFFSSPGRSNSIIESSSHSTSSLASTSFTPEDPAGDLFENVGGGVAIPTISPDPYFDFRKSMQEMVEARDLIDVRANWDYLHELLTCYLDLNPKSAHKFIVGAFADLLVSLMAGSETGGGGRNI	204

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso1g03725	204	ProSiteProfiles	OVATE domain profile.	127	190	IPR006458	-
	Smso1g03725	204	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	41	192	IPR038933	GO:0045892(InterPro)
	Smso1g03725	204	MobiDBLite	consensus disorder prediction	16	37	-	-
	Smso1g03725	204	Pfam	Transcriptional repressor, ovate	131	191	IPR006458	-
	Smso1g03725	204	NCBIfam	uncharacterized plant-specific domain TIGR01568	128	192	IPR006458	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso1g03725	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	338021	Smso28g00424	Smso1g03725
	357466	Smso1g03725	Smso28g00424
	429099	Smso1g03725	Smso28g00424

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:123808378	Smso25g02097	Smso-Chr25:57292908	dispersed
	Smso	Smso-Chr1:123808378	Smso28g00424	Smso-Chr28:11348961	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Smso	Ovate	2.9e-24	No_clan		TF	OFP