Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03737 | ATGGACAATTTGTGGCAGGAGTTCAATTCCGCCGGCGCATTTCACTTGCCGGAGAGTCCAAGGAAGCCGATGGAGTTCTTATCCAGGTCATGGAGTGACGCTGCTCTTCAAACTCTGCATTCTCCGCCGTCTCCATTGATTTCTAAGTCCAGAACAGCCGCTGTTGTTACGCCGGAGACTACCGGTGTTTTCGCCGTCGACGCGGCGGAGGACTCAGATGTATCGCCGTTAGCTTCAGGGAGACTGTCACACAGTAGCGGACCACTGAATCCATCGCACATGGAGGAAACCGATAGTCTGCACATCTCGCCGTCCGACGAGTACGAAGACGTCGTCAAGTTGCTGCAAACCGCGGCTTTATATCTTTTGTTTGAGTTATTAAGGTTGATAAAGAGTTGTTTATCTACTGCACAGTTTTTGGCTGCTGGTTTATTGGCTGCCGCATCAGTTACTTGTTTAGAGGATAATGAGTTATGGTTTTACTCGTTTAGATTGAATAGGGTCGTGTCTTAA | 513 | 48.73 | MDNLWQEFNSAGAFHLPESPRKPMEFLSRSWSDAALQTLHSPPSPLISKSRTAAVVTPETTGVFAVDAAEDSDVSPLASGRLSHSSGPLNPSHMEETDSLHISPSDEYEDVVKLLQTAALYLLFELLRLIKSCLSTAQFLAAGLLAAASVTCLEDNELWFYSFRLNRVVS | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03737 | 170 | MobiDBLite | consensus disorder prediction | 75 | 99 | - | - | |
| Smso1g03737 | 170 | MobiDBLite | consensus disorder prediction | 78 | 98 | - | - | |
| Smso1g03737 | 170 | Pfam | Auxin canalisation | 17 | 117 | IPR008546 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03737 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 141662 | Smso10g00777 | Smso1g03737 | |
| 149230 | Smso1g03737 | Smso20g00901 | |
| 149231 | Smso1g03737 | Smso20g01623 | |
| 429108 | Smso1g03737 | Smso20g01623 | |
| 429109 | Smso1g03737 | Smso29g01426 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:124141398 | Smso10g00777 | Smso-Chr10:8287598 | wgd | |
| Smso | Smso-Chr1:124141398 | Smso20g00901 | Smso-Chr20:15481765 | wgd | |
| Smso | Smso-Chr1:124141398 | Smso20g01623 | Smso-Chr20:53784125 | wgd | |
| Smso | Smso-Chr1:124141398 | Smso29g01426 | Smso-Chr29:39373713 | wgd |