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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso1g03747 ATGTCTATGAATCCGGACGATTACTCGCCGGCGGAAACTCTAATCACCTTCGATCACCCAATTCCTCTCCTCCGACGACCTATAGCAGCCGGAGAAGACGATTCCCTCGTTCTCAGTTTCACAAACCCTAAATCATGGGCATCCGCGTACAAATCGTGTGAGTCGAGTATCATACAACAGTGCGAGGCCGGTGCTCGGATCGGTTGTTCCGTCAGCGCGTCCAAGAAGTGCGCAACGCCGTGGTGGAAAACCCTAACCGGTGGCGGTGTATCTAAAGAGGATTTGATCGGGAGGGAAAAGTGCGAGGAACGAGAAATGGCGGATTGTTTGGAAGCTTCGAGATTGAGTTGTCATAAATTCGCGGAAGATAAGTGTTGGCCGGCGTTTAGAGATGCTCGAATTGTTGTAAAAGGTGGTAGCAGTGATGAAAAAGTGAAGAAGCGTGTTTCAGAGTTGGTTGCTAGGGTTTGTATGGGGGAAAAGAGTATTGGTGGTCTTGAGTTGTACAGATTGGAAGGTTCTTGGACTCAAATTAAATCTCGAATTGGATTCACTATTGTTAGAGGGAGTGATCTGCTGGAGAAACAGGTTTGA 594 47.98 MSMNPDDYSPAETLITFDHPIPLLRRPIAAGEDDSLVLSFTNPKSWASAYKSCESSIIQQCEAGARIGCSVSASKKCATPWWKTLTGGGVSKEDLIGREKCEEREMADCLEASRLSCHKFAEDKCWPAFRDARIVVKGGSSDEKVKKRVSELVARVCMGEKSIGGLELYRLEGSWTQIKSRIGFTIVRGSDLLEKQV 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso1g03747 197 PANTHER EXPRESSED PROTEIN 2 196 - GO:0009536(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso1g03747 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
338030 Smso28g00404 Smso1g03747
357457 Smso1g03747 Smso28g00404
429121 Smso1g03747 Smso28g00404
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr1:124575280 Smso28g00404 Smso-Chr28:10604002 wgd