Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso1g03765 | ATGGCGAATCACGCCGCCGTACTGGCCCTCTTCTGCACCATCTCCTCAATCCTCGGCCCCGTCACTTGCCGCGCCACCACCGCCACCTCCACCGACACCTCCGCCCCCTCCCCAGCCCCGTCCTCACCATCCTCCGACGGCGAATCATTCGTTGTGCAAGGCAAAGTTTACTGCGATCCGTGCCGGATCCAATTCCCCACCAAACTCAGCTATCCCGTCCCCAACACGAAAGTTGTTCTCCGGTGCCGTGAACGCGAATCCGGCACCGAAACGTCGAAGATCGAGGGGAAGAGTGACACGAACGGCATGTACAGCATCACGGCGACCGGGGACCATGAGGAGGAGATCTGTGATGTGCGGATCACGGAGAGCCCTGATAGCAAGTGCCCGGAGGTGATGGATGATGAGAGCAGTGCTAGGGTTTCGTTGACTGATAAGAATGGAGTTCGAGGGAAGATTCGTATGGCGAATCCGATTGGGTTCATGGTGAAGGAAATTGATCCTCGCTGCAAGGAGATTCTCGCTGAGATTGGTATTACTGGGATCTAA | 549 | 57.01 | MANHAAVLALFCTISSILGPVTCRATTATSTDTSAPSPAPSSPSSDGESFVVQGKVYCDPCRIQFPTKLSYPVPNTKVVLRCRERESGTETSKIEGKSDTNGMYSITATGDHEEEICDVRITESPDSKCPEVMDDESSARVSLTDKNGVRGKIRMANPIGFMVKEIDPRCKEILAEIGITGI | 182 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso1g03765 | 182 | PANTHER | PROTEIN DOWNSTREAM OF FLC-RELATED | 10 | 180 | IPR006041 | - | |
| Smso1g03765 | 182 | Pfam | Pollen protein Ole e 1 like | 52 | 136 | - | - | |
| Smso1g03765 | 182 | ProSitePatterns | Pollen proteins Ole e I family signature. | 53 | 62 | IPR006040 | GO:0005615(InterPro) | |
| Smso1g03765 | 182 | MobiDBLite | consensus disorder prediction | 28 | 48 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso1g03765 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 141678 | Smso10g00793 | Smso1g03765 | |
| 149243 | Smso1g03765 | Smso20g00921 | |
| 338037 | Smso28g00388 | Smso1g03765 | |
| 357450 | Smso1g03765 | Smso28g00388 | |
| 429131 | Smso1g03765 | Smso28g00388 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:125018473 | Smso10g00793 | Smso-Chr10:8454681 | wgd | |
| Smso | Smso-Chr1:125018473 | Smso20g00921 | Smso-Chr20:15786488 | wgd | |
| Smso | Smso-Chr1:125018473 | Smso28g00388 | Smso-Chr28:9992550 | wgd |