Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso20g01602	ATGCGTTCCGGGCAATGTTTGATGGCGGGTACAGAGCAAGAGAAAGATGCTAAAGACATCGAGATACCAAATATCAGATGGGATGTCTTTGAGTTGATGATGAGATACATATATACCGGGTCCATAGATGTGAAGCTGGAAATTGCTCAGGATCTTCTTAGAGCTGCAGATCAGTATCTTCTTGAGGGGCTAAAGCGTCTTTGTGAGTATACCATCGCACAGGATATACTAGTGGATAATGTATCACTTATCGGAGGCCTTCAATGCTGTGTCACTAAGGAATGCATGCATTCTATTTGTTCTCGAGAACTTCGACAAGTTAAATGCAAAATCATGGTGGCCTTTAAAAGGTTACGGTAA	360	41.94	MRSGQCLMAGTEQEKDAKDIEIPNIRWDVFELMMRYIYTGSIDVKLEIAQDLLRAADQYLLEGLKRLCEYTIAQDILVDNVSLIGGLQCCVTKECMHSICSRELRQVKCKIMVAFKRLR	119

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso20g01602	119	PANTHER	ARM REPEAT PROTEIN INTERACTING WITH ABF2	9	84	IPR044282	-
	Smso20g01602	119	Pfam	BTB-POZ domain	7	74	IPR000210	GO:0005515(InterPro)
	Smso20g01602	119	SUPERFAMILY	POZ domain	14	75	IPR011333	-
	Smso20g01602	119	Gene3D	Potassium Channel Kv1.1; Chain A	4	112	IPR011333	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso20g01602	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	147355	Smso17g00254	Smso20g01602
	149211	Smso1g03715	Smso20g01602
	149662	Smso20g01602	Smso8g00282
	429091	Smso1g03715	Smso20g01602

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:123640567	Smso20g01602	Smso-Chr20:52650246	wgd
	Smso	Smso-Chr17:2741811	Smso20g01602	Smso-Chr20:52650246	wgd
	Smso	Smso-Chr20:52650246	Smso8g00282	Smso-Chr8:3863610	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Smso	BTB	9.8e-13	CL0033		TR	TRAF