Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso20g01708	ATGTGTTTGGGTGTTGAATTTGATCAGATGGATAAAGATATGGAAGATGTTGACAGTGATAAACGGGTCGGGTGGCTCCATTTGGAACAGTATTCTGCTGCTGGTAATGTTTTTGGGGAGCCCAAAATGATGACCCGGGTTGGGGATGCGTACCAGGCACAAATCCCATCTTTGATGACACAAAATGAGCGATCGCGTGATGATCAAAACCACTTTGAGTTTTGTCTGTCAATTCCTGTAACTTGGGTTCACTATCATAAGAACAAGGAAGAAACAAACTATGGTTTCCTTCCGGTTCCTTGTTCATCGGTTGAAGAATCTTGGAGCGCGATTGAACGTGATGGTTTTCTTCTTGGGTTATATATATTTGGCAAGAATCTTGGTGTTGTAAGCAACTTTGTGGGGAGTAAAGGAATGCCAAATGTAGTGGCTTATTACTATGGGAAGTTTTATAGAAGCGGTCAACACCAAAAATGGTCAACATATCGGAAGAAAAGAAGTCGCAAGTCCATGCCCGGAAAATGGATTTTCAGTGGGTGGAGGCGACAGGAGCTTTTGTCGCGGGTACTTCCTAATGTCACAAATGAATGCAAAAGTAGACTGACACAGGTTGTAAGAATGTTTGATGAGGGAAAACTTCCATTGGAGAAATATGTATTTGCTATAAGGGATATTGTGGGCATCAATCTTCTTATAGAATCCATAGCCATTGGCAAAGGAAAACAAGACCTTAGTAGCAAGAAGCCCAAAGGGATGTTAAAAAGCAAACAAATTCAATCCAAACGCGTGTGTCTTAAAACAGAAGAAATTGTTAACAGTTTGAATGATAGAATGGGGCTAAGCAAAAAGCGGTTAACCGACCTCTTTTGGGAAGTTGTGTGGCCTCGTCTTTTAGCCCGAGGGTGGCACTCTGAGCAGCCTAAAAACTATGCTGTCCAAAACTCAAAGAATTCTTTAGTGTTTCTTGCACCCGGTGTAACGAAGTTTTCTAGGAGGACCTTGGAGAAAGGAAGTCAATATTTTGACTCGTTCACTGAAGTCCTGAATAAAGTGGCATCTGAACCGCACCTTCTTGACCACCAACCTGATCCGGACCGGATGGTGGAGCCACATGTGAACCAAGGCCCGGACGATGAACAAGATTTGATGAAATACACAATTGTGGATACCACTTTGGTGGGGCTTGTTAAAGTCAGAGAGGTCACAAGTTTGCCTGCTTTTGAACCTTCTGATACGCAAGCATCGACTAGTGTTTCGAGAACAAAACGTCAACAGGTTAACAATATTATAAATAACAACACGAGTGATGAAGATGAGGCCATAGAAAAAGCGCGTTATGAGAAGAAGCGTGCAAAGATGGTGGTAGACTTGAACAACCCTCGAATGGGTCCGGGTCCAGATTCGGTTTTAACTGAAACGACCACCAACCAGACTGAGTTGTTGAATGCCGGTCACAGGCAGAGTACAAGAAACCGTGCATTGACCACAAAAGCATTGGAAGCTCTAGCGAATGGATTCCTGAACCCGAAAAAGAGGAGGAGCGGGCCTGAGGATGGGGCCCGTAGGCGTGTTCGTGGTAAAACCGCTCTTGTCGCGAGTTGTGAGTCTTTAATGGTTCATCCCATATAG	1629	43.89	MCLGVEFDQMDKDMEDVDSDKRVGWLHLEQYSAAGNVFGEPKMMTRVGDAYQAQIPSLMTQNERSRDDQNHFEFCLSIPVTWVHYHKNKEETNYGFLPVPCSSVEESWSAIERDGFLLGLYIFGKNLGVVSNFVGSKGMPNVVAYYYGKFYRSGQHQKWSTYRKKRSRKSMPGKWIFSGWRRQELLSRVLPNVTNECKSRLTQVVRMFDEGKLPLEKYVFAIRDIVGINLLIESIAIGKGKQDLSSKKPKGMLKSKQIQSKRVCLKTEEIVNSLNDRMGLSKKRLTDLFWEVVWPRLLARGWHSEQPKNYAVQNSKNSLVFLAPGVTKFSRRTLEKGSQYFDSFTEVLNKVASEPHLLDHQPDPDRMVEPHVNQGPDDEQDLMKYTIVDTTLVGLVKVREVTSLPAFEPSDTQASTSVSRTKRQQVNNIINNNTSDEDEAIEKARYEKKRAKMVVDLNNPRMGPGPDSVLTETTTNQTELLNAGHRQSTRNRALTTKALEALANGFLNPKKRRSGPEDGARRRVRGKTALVASCESLMVHPI	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso20g01708	542	SUPERFAMILY	Homeodomain-like	106	154	IPR009057	-
	Smso20g01708	542	ProSiteProfiles	SANT domain profile.	103	154	IPR017884	-
	Smso20g01708	542	PANTHER	ATROPHIN-RELATED	11	435	-	GO:0003714(PANTHER)\|GO:0005634(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso20g01708	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	149686	Smso20g01708	Smso28g00309
	429054	Smso1g03631	Smso20g01708
	429668	Smso20g01708	Smso28g00309
	429669	Smso20g01708	Smso28g00472

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr20:57367472	Smso9g00451	Smso-Chr9:9959858	dispersed
	Smso	Smso-Chr1:121761057	Smso20g01708	Smso-Chr20:57367472	wgd
	Smso	Smso-Chr20:57367472	Smso28g00472	Smso-Chr28:13034018	wgd
	Smso	Smso-Chr20:57367472	Smso29g01491	Smso-Chr29:41082062	wgd