Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso20g01741 | ATGCTCAATGTCTTCAACAAAAGCCTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTGCAAAGCCCAAAGTCATCATCAAAAGGTTTGGAAAGTCAAACTCTAGAGGTCAAGATTCATCAAACACAAATGGGTCAGCCACAATTCACCCAAATAATCATTTGGGTATTTCAAAATCAGAAACCCCACTTCGAATTGCAACTTTTAATGCTGCTTTATTCTCCATGGCACCAGCAGTCCCAGAGTTGACCAAAAAAGCTTCAAGCTTTGACCTTGGCAAAGATGATCAAGATTTCACAAAGGTAACCTCTGATTCCTCAGTTTCTTACACTAATTCAAGATCAAAATCAATGGTTGAAAGACCCAAAAGCATATTAAAACAATCACCATTGCATTTAAGTAGTTCAGAAACTCTATCAAAGCAGCAAAAATTTGCAAAGTCAAAGCTTAGAGTATCGATTAATTTACCCGATAACGAGATCTCATTGAAGAGAAGTGGGCAGTTGAGCTTAGTTGTAGATGAAACCAAAACTGACCCGAGTTTAAAAACTAGTGATTCTAAGGGTATAAGCAAGATTTTGAAAGGAAAGGGTGTTTTGGGATCACAAAACAGTTTTTCTTCAAGAGAAGTTGAAAGTCAAAGGGGAAGTTACCGGTCAACGAAGACTGTTCTTGAAGTTTTGAAAGAATTGGATGCAGATATATTGGCTCTACAGGATGTAAAAGCTGAGGAAGAAAAGGATATGAAGCCATTGTCTGATTTGGCTGCTGCTTTGGGTATGAATTATGTGTTTGCTGAGAGTTGGGCACCAGAATATGGTAATGCAGTTCTGTCAAAGTGGCCGATTAAACGATCTAAAGTTCAGAAAATTTTTGATGATTCGGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTTCCCCAAACCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAGAATTGGCGAATGAAACAAATAAGTGCAATAATCGAATCTAGTGAGAGACCACACATCTTAGCCGGAGGTATCAATTCTCTTGATGAAACAGACTACTCGCCCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCAACACCAAAAGTTGAAGTGATGAAGTACTTAAAGGACAAACGGTACACCGATGCTAAGGACTCTGCTGGCGAATGTGAATCTGTAGTGATTATTGCTAAAGGCCAAAACGTGCAGGGTACTTGCAAATATGGCACTAGGGTAGATTACATATTGGTGTCCCCTGATTCTCCCTACAAGTTTGTTCCCGGTTCATATACGGTTTTGTCATCAAAAGGTACTTCTGACCATCATATAGTCAAAGTTGATGTAACGAAGGTAGACGGATCTGGTCAACAACCGTATGTTAGGAGGCATAGACATCCTAAACAAAAAGTTGTGAAGATTATGAATTCTAATTCATCAAAAGGGGTATGGAAAGTGCAAACTTTATACAGATAG | 1512 | 39.68 | MLNVFNKSLRRLCSKLRWPVRRRAKPKVIIKRFGKSNSRGQDSSNTNGSATIHPNNHLGISKSETPLRIATFNAALFSMAPAVPELTKKASSFDLGKDDQDFTKVTSDSSVSYTNSRSKSMVERPKSILKQSPLHLSSSETLSKQQKFAKSKLRVSINLPDNEISLKRSGQLSLVVDETKTDPSLKTSDSKGISKILKGKGVLGSQNSFSSREVESQRGSYRSTKTVLEVLKELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQISAIIESSERPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKDKRYTDAKDSAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYTVLSSKGTSDHHIVKVDVTKVDGSGQQPYVRRHRHPKQKVVKIMNSNSSKGVWKVQTLYR | 503 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso20g01741 | 503 | Gene3D | Endonuclease-exonuclease-phosphatase | 207 | 463 | IPR036691 | - | |
| Smso20g01741 | 503 | MobiDBLite | consensus disorder prediction | 105 | 122 | - | - | |
| Smso20g01741 | 503 | MobiDBLite | consensus disorder prediction | 36 | 60 | - | - | |
| Smso20g01741 | 503 | Coils | Coil | 231 | 251 | - | - | |
| Smso20g01741 | 503 | PANTHER | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR | 13 | 460 | IPR051916 | GO:0005783(PANTHER)|GO:0006506(PANTHER) | |
| Smso20g01741 | 503 | MobiDBLite | consensus disorder prediction | 31 | 60 | - | - | |
| Smso20g01741 | 503 | MobiDBLite | consensus disorder prediction | 105 | 125 | - | - | |
| Smso20g01741 | 503 | FunFam | Endonuclease-exonuclease-phosphatase family protein | 211 | 464 | - | - | |
| Smso20g01741 | 503 | Pfam | Endonuclease-Exonuclease-phosphatase family | 219 | 454 | IPR005135 | GO:0003824(InterPro) | |
| Smso20g01741 | 503 | SUPERFAMILY | DNase I-like | 224 | 461 | IPR036691 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso20g01741 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 429086 | Smso1g03705 | Smso20g01741 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:123457957 | Smso20g01741 | Smso-Chr20:59122834 | wgd | |
| Smso | Smso-Chr20:59122834 | Smso29g01523 | Smso-Chr29:41756268 | wgd |