Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso20g01803	ATGATTCCCCTTGCCAAGAATTCCGGCCACCACTCTGACCTCTCTGTTTGTTTCCAGGATCAAAATAATAAGGCTGGCCGGCTGGGACCACGGCCACGTCTCAGACAACATTCAAATCATCCTTCTCACCAAGCACCCGTCCCGGTGCATTCTTTAGGCTTTTTAATTTCTAATCACTGCACTACACCCACTCGACTCCCTCGATTCACTGCCGCTGTAGCCGCCAGCCGGCCGGCAATCTATCATACCGGCGATCATCGTTTCTTCCTCGATCAACACGAGCCTTTCAACTCCTCAAAGAAGCTAGAATATCTGTTTGAAGATAGTTCTATTTTGATTTTCTGTTCGGAACAAATTATGGCTTCTGTTGCTCATCTTCATCATTCTCCTCTCGCCGGAAACAACCGTAATCTAAATCCTGTTAGGCATATTCCTATCCTCCGATTGCCAACCCTAACCGGCAAAAACCTCGTCAATTTCACCGGCTTGTCTCTCCGATCCAATCCAATCAACCCTAATTTGCTATCTAATCGACAACCTATTTCCTGTGCCGCCGCCGGCGGCAGTGGCGGCGGCAATGCCGGTGTCGGCCATGGCAGCGGCGGCGGCGGAGGTGACGACGGTGATAGTGACCGGAGTAGTGCCGGAAAATTCGACGACAGTTTCGGCCCGTTTGGGGCTTTTCTTTGCGGTTGGAGATCTAGGGTTTCTGCTGATCCCCAATTTCCATTCAAGGTTTTAATGGAGGAAGTTGTTGGTGTGAGTGCAACTGTATTTGGTGACATGGCAACCCGCCCCAATTTTGGTCTACACGAGCTAGATTTCGTGTTCTCCACGTTAGTTGTTGGCTCAATCTTGAATTTCACCCTAATGTATTTGTTAGCACCCACCATGACATCCGGATCATCAACTCTCCCTTTCGTATTCGCCAATTCACCAACGAGCCACATGTTCGAGCCCGGTGCATACACCCTGGTTAACCGGCTAGGTACATTTGTGTACAAAGGGGCATTGTTTGCAGCAGTGGGGCTTGCGGCTGGTTTAGTTGGGACCGCGTTGTCAAACGGGTTGATCAAGATTAGGAAGAAGATGGACCCTGGTTTCGTGTCACCAAACAAGGCTCCACCAACGGTTTTGAATGCGGCCACGTGGGCGATTCATATGGGTTTGAGTGCTAATTTGAGGTACCAGAGTCTGAATGGGATTGAGTTTGTGCTGGCCAAGGGGTTGCCGCCGTTGTTGTTTAAGAGCTCGGTGGTCGGGTTGCGGTTGGTGAATAATGTTGTTGGTGGGATGACATTTGTGGTGTTGGCTAGGATGACTGGATCACAGAGTGCTGGTGGTGATCAAGAGAAGATTGGTGATGAATCGGTTTCGGTTTCGGATGATGAGAAGAAGTTACTGAGGGATGAAGTTCATTCCAAGTGA	1428	49.65	MIPLAKNSGHHSDLSVCFQDQNNKAGRLGPRPRLRQHSNHPSHQAPVPVHSLGFLISNHCTTPTRLPRFTAAVAASRPAIYHTGDHRFFLDQHEPFNSSKKLEYLFEDSSILIFCSEQIMASVAHLHHSPLAGNNRNLNPVRHIPILRLPTLTGKNLVNFTGLSLRSNPINPNLLSNRQPISCAAAGGSGGGNAGVGHGSGGGGGDDGDSDRSSAGKFDDSFGPFGAFLCGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMATRPNFGLHELDFVFSTLVVGSILNFTLMYLLAPTMTSGSSTLPFVFANSPTSHMFEPGAYTLVNRLGTFVYKGALFAAVGLAAGLVGTALSNGLIKIRKKMDPGFVSPNKAPPTVLNAATWAIHMGLSANLRYQSLNGIEFVLAKGLPPLLFKSSVVGLRLVNNVVGGMTFVVLARMTGSQSAGGDQEKIGDESVSVSDDEKKLLRDEVHSK	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso20g01803	475	MobiDBLite	consensus disorder prediction	194	215	-	-
	Smso20g01803	475	MobiDBLite	consensus disorder prediction	444	475	-	-
	Smso20g01803	475	MobiDBLite	consensus disorder prediction	455	475	-	-
	Smso20g01803	475	MobiDBLite	consensus disorder prediction	25	44	-	-
	Smso20g01803	475	Pfam	Protein RETICULATA-related	235	402	IPR021825	-
	Smso20g01803	475	PANTHER	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	167	446	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso20g01803	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	346424	Smso20g01803	Smso1g03565
	429018	Smso1g03565	Smso20g01803

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4969633	Smso	Smso20g01803	Smso-Chr20:61122602	Smso26g01466	Smso-Chr26:19032750
	5025336	Smso	Smso1g03565	Smso-Chr1:120615090	Smso20g01803	Smso-Chr20:61122602
	5077999	Smso	Smso20g01803	Smso-Chr20:61122602	Smso28g00521	Smso-Chr28:14602190