Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso20g01818	ATGAAGTACGTCTTGGTCACCGGAGGGGTGGTAAGCGGTCTCGGCAAGGGCGTCACCGCCAGCAGCATTGGCGTCATTCTCAAGGCGTCTGGCCTCCGCGTCACCTCGATCAAAATCGATCCTTACTTGAACACTGATGCTGGTACTATGTCTCCATTCGAACATGGAGAGGTTTTTGTTCTTGATGATGGTGGAGAGGTTGATCTAGATTTGGGTAACTATGAACGGTTCTTAGATGTGAGGCTTACCAGGGATAACAACATAACAACCGGAAAGATCTATCAGTCTGTTCTTGAAAAGGAACGAAAAGGAGATTATCTTGGAAAAACAGTTCAGGTAGTCCCACACATAACAGATGCTATTAAGGATTTGATTGAGTCGGTTGCTGCTATTCCTGTGGACGGCAAAGTGGGCCCAGCAGATGTGTGTGTGATAGAATTGGGAGGGACAGTTGGTGACATTGAGTCTATGCCCTTCATAGAGGCTTTGAGGCAGTTATTTTTCTCTAAAGGACCAGATAATTTCTGCCTTATTCATGTTAGCCTTGTACCTGTGCTTGGTGTTGTTGGGGAACAGTTCACTTTGATGCTTGTTATTTCAGAAAACAAAACCTACACAACACAGTGTTCGGGAACTGCGAGCATTAGGCCTGACCCCTCACTTTTTAGTATGTCGGTCTGCTCAGCTGTCATGGTTACCTTGCAGCCGTTGTTGGAAACCACAAAGCAGAAACTCTCACAATTTTGCCATGTACCTGTTGCTAGCATTCTCAATATACATGATGTTCCAAACATTTGGCACGTCCCTTTTTTACTTCGGAACCAAAATGCTCATGAGGCAATCCTGAAACAGCTAGCACTACTCTGTGTAGCCATACCTCCAAATTTACAAGAGTGGACTACTAGGGCAGAAACTTTTGACAACCTCACCAATTCTGTCAAGATTGCAATGGTGGGGAAATATGTTGGCCTAACAGACTCTTATTTGTCTGTTGTTAAGGCCCTTCTTCATGCGTGCACTGCGTTGTCATTAAAACCCTCCATTGAATGGATTGCAGCCTCTGATCTTGAAGATGAAAGTGCCAAATTGACACCAGAAGCTCATACAAAGGCCTGGGAGACTCTAAGGAATTCAGCATGTGTTTTGGTTCCTGGTGGATTTGGAGATCGCGGTGTGACAGGAATGATACTAGCTGCTAAGTATGCCCGAGAGAATAAAGTTCCATATCTTGGAATTTGCTTAGGCATGCAGATATCTGTTATTGAGATTTCCAGATCGATCTTGGGCTGGAAAGGGGCAAATAGTACTGAATTTGATGAGCATGCGCCCAATCCTGTTGTAATATTCATGCCAGAGGGTTCAAGAACACACATGGGGAACACAATGAGACTTGGCTCTCGAAGAACCTTACTGCAGACATCCGATTGTATCACTGCAAAACTGTATCAAAATCCAGAGTACGTGGATGAGCGACATAGACATCGTTATGAGGTGAATCCTGAGGTTGTTGCGGATTTAGAAAAAACCGGCTTAAGATTTGTGGGGAAGGATGAGAGTGGTCAACGGATGGAGATTTTAGAACTTCCAAGCCATCCATTCTATGTGGGGGTACAGTTTCATCCTGAGTATAAATCGCGACCTGGAAAGCCTTCAGCCCTGTTTTTAGGTCTTATATTAGCAGCAACCAGGAAGTTGGAAGCATATGTGAAGACACATCAGAATGGATCTATTTAA	1734	44.41	MKYVLVTGGVVSGLGKGVTASSIGVILKASGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVRLTRDNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKDLIESVAAIPVDGKVGPADVCVIELGGTVGDIESMPFIEALRQLFFSKGPDNFCLIHVSLVPVLGVVGEQFTLMLVISENKTYTTQCSGTASIRPDPSLFSMSVCSAVMVTLQPLLETTKQKLSQFCHVPVASILNIHDVPNIWHVPFLLRNQNAHEAILKQLALLCVAIPPNLQEWTTRAETFDNLTNSVKIAMVGKYVGLTDSYLSVVKALLHACTALSLKPSIEWIAASDLEDESAKLTPEAHTKAWETLRNSACVLVPGGFGDRGVTGMILAAKYARENKVPYLGICLGMQISVIEISRSILGWKGANSTEFDEHAPNPVVIFMPEGSRTHMGNTMRLGSRRTLLQTSDCITAKLYQNPEYVDERHRHRYEVNPEVVADLEKTGLRFVGKDESGQRMEILELPSHPFYVGVQFHPEYKSRPGKPSALFLGLILAATRKLEAYVKTHQNGSI	577

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso20g01818	577	CDD	CTPS-N	2	283	IPR017456	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Smso20g01818	577	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	287	IPR027417	-
	Smso20g01818	577	Pfam	CTP synthase N-terminus	2	287	IPR017456	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Smso20g01818	577	FunFam	CTP synthase	310	575	-	-
	Smso20g01818	577	CDD	GATase1-CTP-Synthase	313	558	IPR033828	GO:0003883(InterPro)\|GO:0006241(InterPro)
	Smso20g01818	577	Gene3D	-	310	575	IPR029062	-
	Smso20g01818	577	Gene3D	-	1	307	IPR027417	-
	Smso20g01818	577	NCBIfam	CTP synthase (glutamine hydrolyzing)	1	559	IPR004468	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Smso20g01818	577	FunFam	CTP synthase	1	307	-	-
	Smso20g01818	577	PANTHER	CTP SYNTHASE	1	573	IPR004468	GO:0003883(PANTHER)\|GO:0003883(InterPro)\|GO:0006221(InterPro)\|GO:0006241(PANTHER)\|GO:0019856(PANTHER)\|GO:0042802(PANTHER)
	Smso20g01818	577	ProSiteProfiles	Glutamine amidotransferase type 1 domain profile.	321	567	-	-
	Smso20g01818	577	SUPERFAMILY	Class I glutamine amidotransferase-like	312	563	IPR029062	-
	Smso20g01818	577	Pfam	Glutamine amidotransferase class-I	324	558	IPR017926	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso20g01818	K01937	CTP synthase [EC:6.3.4.2]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	346428	Smso20g01818	Smso1g03594
	429033	Smso1g03594	Smso20g01818

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4969647	Smso	Smso20g01818	Smso-Chr20:61582773	Smso2g01335	Smso-Chr2:24871663
	5011912	Smso	Smso16g02100	Smso-Chr16:85549072	Smso20g01818	Smso-Chr20:61582773
	5014748	Smso	Smso21g02389	Smso-Chr21:35723277	Smso20g01818	Smso-Chr20:61582773
	5014899	Smso	Smso22g00021	Smso-Chr22:185237	Smso20g01818	Smso-Chr20:61582773
	5015437	Smso	Smso24g00050	Smso-Chr24:762008	Smso20g01818	Smso-Chr20:61582773
	5018555	Smso	Smso4g00232	Smso-Chr4:2842273	Smso20g01818	Smso-Chr20:61582773
	5025345	Smso	Smso1g03594	Smso-Chr1:121113060	Smso20g01818	Smso-Chr20:61582773
	5078188	Smso	Smso20g01818	Smso-Chr20:61582773	Smso29g01587	Smso-Chr29:42910120